RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 FCF1Q9Y324 198 aaKnown RBP14.82□□□□□ -0.04
SEC13-208ENST00000397109 DNAH14Q0VDD8 3507 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 NCOR2Q9Y618 2525 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 RASA4BC9J798 803 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 RASA4O43374 803 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 BUB1O43683 1085 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 KCNK5O95279 499 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 GSRP00390 522 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 CEACAM1P13688 526 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 KCNA4P22459 653 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 HCAR3P49019 387 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 CSNK1EP49674 416 aaKnown RBP14.82□□□□□ -0.04
SEC13-208ENST00000397109 CCNHP51946 323 aaPredicted RBP14.82□□□□□ -0.04
SEC13-208ENST00000397109 SNRPD1P62314 119 aaKnown RBP14.82□□□□□ -0.04
SEC13-208ENST00000397109 TUBB4BP68371 445 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 SERINC3Q13530 473 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 POM121L1PQ3SYA9 428 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 INO80DQ53TQ3 878 aaPredicted RBP14.82□□□□□ -0.04
SEC13-208ENST00000397109 ARSIQ5FYB1 569 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 AGBL4Q5VU57 503 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 NEK5Q6P3R8 708 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 ADAT2Q7Z6V5 191 aaKnown RBP14.82□□□□□ -0.04
SEC13-208ENST00000397109 NIPA2Q8N8Q9 360 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 HMCESQ96FZ2 354 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 LRIG1Q96JA1 1093 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 ORAI3Q9BRQ5 295 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 DESI2Q9BSY9 194 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 NUP85Q9BW27 656 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 HDAC8Q9BY41 377 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 ANAPC7Q9UJX3 599 aa14.82□□□□□ -0.04
SEC13-208ENST00000397109 A0A1B0GVT2 93 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 ARHGAP42A6NI28 874 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 MYO1FO00160 1098 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 PLK4O00444 970 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 LATO43561 262 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 LEFTY1O75610 366 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 POP4O95707 220 aaKnown RBP14.81□□□□□ -0.04
SEC13-208ENST00000397109 H2AFZP0C0S5 128 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 TMEM253P0C7T8 217 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 ZNF883P0CG24 379 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 NOVA1P51513 510 aaKnown RBP14.81□□□□□ -0.04
SEC13-208ENST00000397109 CA9Q16790 459 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 PPP6R3Q5H9R7 873 aaPredicted RBP14.81□□□□□ -0.04
SEC13-208ENST00000397109 RFX8Q6ZV50 586 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 CYP4V2Q6ZWL3 525 aaPredicted RBP14.81□□□□□ -0.04
SEC13-208ENST00000397109 H2AFVQ71UI9 128 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 ERN2Q76MJ5 926 aaKnown RBP14.81□□□□□ -0.04
SEC13-208ENST00000397109 TRIM69Q86WT6 500 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 OR2AP1Q8NGE2 309 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 GRIN3AQ8TCU5 1115 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 ARRDC3Q96B67 414 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 KCTD15Q96SI1 283 aaPredicted RBP14.81□□□□□ -0.04
SEC13-208ENST00000397109 TM6SF2Q9BZW4 377 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 ZWILCHQ9H900 591 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 LCMT1Q9UIC8 334 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 DMTF1Q9Y222 760 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 ANKRD6Q9Y2G4 727 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 REXO2Q9Y3B8 237 aaKnown RBP14.81□□□□□ -0.04
SEC13-208ENST00000397109 WASF2Q9Y6W5 498 aa14.81□□□□□ -0.04
SEC13-208ENST00000397109 H3BRJ5 948 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 VILLO15195 856 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 GJB3O75712 270 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 ITGB7P26010 798 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 ARL4AP40617 200 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 VAV2P52735 878 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 C21orf59P57076 290 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 BNC1Q01954 994 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 RAD51Q06609 339 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 KIF5AQ12840 1032 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 HNRNPDQ14103 355 aaKnown RBP14.8□□□□□ -0.04
SEC13-208ENST00000397109 TCEAL1Q15170 157 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 DPYSL2Q16555 572 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 SLC45A4Q5BKX6 768 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 PIP5KL1Q5T9C9 394 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 PSAPL1Q6NUJ1 521 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 PIP4P1Q86T03 277 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 RYBPQ8N488 228 aaPredicted RBP14.8□□□□□ -0.04
SEC13-208ENST00000397109 LZTR1Q8N653 840 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 OR2I1PQ8NGU4 316 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 TEKT4Q8WW24 435 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 CTNNBL1Q8WYA6 563 aaPredicted RBP14.8□□□□□ -0.04
SEC13-208ENST00000397109 GAREM1Q9H706 876 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 LRRC19Q9H756 370 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 UVRAGQ9P2Y5 699 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 ACTL7AQ9Y615 435 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 SLCO1B1Q9Y6L6 691 aa14.8□□□□□ -0.04
SEC13-208ENST00000397109 PJA2O43164 708 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 DFNA5O60443 496 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 TMCC1O94876 653 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 SLU7O95391 586 aaKnown RBP14.79□□□□□ -0.04
SEC13-208ENST00000397109 ADRB1P08588 477 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 ERCC2P18074 760 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 CD38P28907 300 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 ARHGAP25P42331 645 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 NEK3P51956 506 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 PPP2CBP62714 309 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 PPP2CAP67775 309 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 HADHQ16836 314 aaKnown RBP14.79□□□□□ -0.04
SEC13-208ENST00000397109 KIF19Q2TAC6 998 aa14.79□□□□□ -0.04
SEC13-208ENST00000397109 HLA-BQ31612 363 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms