RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 UBA2Q9UBT2 640 aaPredicted RBP10.75□□□□□ -0.69
NUP98-205ENST00000397007 FCF1Q9Y324 198 aaKnown RBP10.75□□□□□ -0.69
NUP98-205ENST00000397007 PLRG1O43660 514 aaKnown RBP10.75□□□□□ -0.69
NUP98-205ENST00000397007 SOCS5O75159 536 aa10.75□□□□□ -0.69
NUP98-205ENST00000397007 CES1P23141 567 aa10.75□□□□□ -0.69
NUP98-205ENST00000397007 ITGB7P26010 798 aa10.75□□□□□ -0.69
NUP98-205ENST00000397007 P2RY2P41231 377 aa10.75□□□□□ -0.69
NUP98-205ENST00000397007 RETSATQ6NUM9 610 aa10.75□□□□□ -0.69
NUP98-205ENST00000397007 DPY19L3Q6ZPD9 716 aa10.75□□□□□ -0.69
NUP98-205ENST00000397007 C1orf210Q8IVY1 113 aa10.75□□□□□ -0.69
NUP98-205ENST00000397007 TFB1MQ8WVM0 346 aaKnown RBP10.75□□□□□ -0.69
NUP98-205ENST00000397007 HTR3CQ8WXA8 447 aa10.75□□□□□ -0.69
NUP98-205ENST00000397007 ARRDC3Q96B67 414 aa10.75□□□□□ -0.69
NUP98-205ENST00000397007 OXNAD1Q96HP4 312 aaPredicted RBP10.75□□□□□ -0.69
NUP98-205ENST00000397007 RPL10LQ96L21 214 aaKnown RBP10.75□□□□□ -0.69
NUP98-205ENST00000397007 MTG2Q9H4K7 406 aa10.75□□□□□ -0.69
NUP98-205ENST00000397007 SERGEFQ9UGK8 458 aa10.75□□□□□ -0.69
NUP98-205ENST00000397007 SCML1Q9UN30 329 aa10.75□□□□□ -0.69
NUP98-205ENST00000397007 SLC7A4O43246 635 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 ATG13O75143 517 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 RBL1P28749 1068 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 FNTAP49354 379 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 CCR3P51677 355 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 MYLK3Q32MK0 819 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 RFX6Q8HWS3 928 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 ZNF641Q96N77 438 aaPredicted RBP10.74□□□□□ -0.69
NUP98-205ENST00000397007 TDRD1Q9BXT4 1180 aaKnown RBP10.74□□□□□ -0.69
NUP98-205ENST00000397007 MUC3BQ9H195 1237 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 SUN2Q9UH99 717 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 FGGP02679 453 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 TIE1P35590 1138 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 NRLP54845 237 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 BZW1Q7L1Q6 419 aaKnown RBP10.74□□□□□ -0.69
NUP98-205ENST00000397007 HEMGNQ9BXL5 484 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 FAM126AQ9BYI3 521 aaPredicted RBP10.74□□□□□ -0.69
NUP98-205ENST00000397007 SLC25A51Q9H1U9 297 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 SMARCAL1Q9NZC9 954 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 SLC25A13Q9UJS0 675 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 TBC1D3BA6NDS4 549 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 PPP1R12AO14974 1030 aaPredicted RBP10.74□□□□□ -0.69
NUP98-205ENST00000397007 LATO43561 262 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 PTMAP06454 111 aaKnown RBP10.74□□□□□ -0.69
NUP98-205ENST00000397007 CXCR5P32302 372 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 SEMA5AQ13591 1074 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 TMEM259Q4ZIN3 620 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 Q6ZVU0 165 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 ATPAF2Q8N5M1 289 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 DTX3LQ8TDB6 740 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 LRRN4Q8WUT4 740 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 MRGPRX2Q96LB1 330 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 EIF2B3Q9NR50 452 aaKnown RBP10.74□□□□□ -0.69
NUP98-205ENST00000397007 NFKBIL1Q9UBC1 381 aaPredicted RBP10.74□□□□□ -0.69
NUP98-205ENST00000397007 SAR1BQ9Y6B6 198 aa10.74□□□□□ -0.69
NUP98-205ENST00000397007 CFAP69A5D8W1 941 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 MTSS1O43312 755 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 PHF2O75151 1096 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 HLA-EP13747 358 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 GNG11P61952 73 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 AP1S1P61966 158 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 ARMC3Q5W041 872 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 SRLQ86TD4 932 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 CCDC117Q8IWD4 279 aaPredicted RBP10.73□□□□□ -0.69
NUP98-205ENST00000397007 ASB12Q8WXK4 309 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 P3H4Q92791 437 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 SPATA13Q96N96 652 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 C1QTNF1Q9BXJ1 281 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 OSBPL1AQ9BXW6 950 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 KDM4CQ9H3R0 1056 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 TRHDEQ9UKU6 1024 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 PGRMC1O00264 195 aaKnown RBP10.73□□□□□ -0.69
NUP98-205ENST00000397007 ZBTB24O43167 697 aaPredicted RBP10.73□□□□□ -0.69
NUP98-205ENST00000397007 SP9P0CG40 484 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 SUOXP51687 545 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 CCNHP51946 323 aaPredicted RBP10.73□□□□□ -0.69
NUP98-205ENST00000397007 SEC13P55735 322 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 TRAF2Q12933 501 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 KCNJ11Q14654 390 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 TMEM52BQ4KMG9 183 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 RANBP10Q6VN20 620 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 AGGF1Q8N302 714 aaeCLIP10.73□□□□□ -0.699e-10■■□□□ 12.9
NUP98-205ENST00000397007 ATG4AQ8WYN0 398 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 EID2BQ96D98 161 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 PCED1AQ9H1Q7 454 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 ZDHHC4Q9NPG8 344 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 SEPT3Q9UH03 358 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 FBXL21Q9UKT6 434 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 THADAQ6YHU6 1953 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 IGHV1OR15-9A0A0B4J2B8 117 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 CTAGE9A4FU28 777 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 PROB1E7EW31 1015 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 CBX4O00257 560 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 EPOP01588 193 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 MMP13P45452 471 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 RENBPP51606 427 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 STK40Q8N2I9 435 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 NOD2Q9HC29 1040 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 GLOD4Q9HC38 313 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 IL36AQ9UHA7 158 aa10.73□□□□□ -0.69
NUP98-205ENST00000397007 NDRG2Q9UN36 371 aaKnown RBP10.73□□□□□ -0.69
NUP98-205ENST00000397007 ZFC3H1O60293 1989 aaKnown RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms