RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 CASQ2O14958 399 aaPredicted RBP16.2■□□□□ 0.18
CCHCR1-202ENST00000396263 AHSGP02765 367 aa16.2■□□□□ 0.18
CCHCR1-202ENST00000396263 GABRB3P28472 473 aa16.2■□□□□ 0.18
CCHCR1-202ENST00000396263 ADSLP30566 484 aaPredicted RBP16.2■□□□□ 0.18
CCHCR1-202ENST00000396263 DEFB115Q30KQ5 88 aa16.2■□□□□ 0.18
CCHCR1-202ENST00000396263 ARL13AQ5H913 290 aaPredicted RBP16.2■□□□□ 0.18
CCHCR1-202ENST00000396263 ACAD11Q709F0 780 aa16.2■□□□□ 0.18
CCHCR1-202ENST00000396263 CCDC117Q8IWD4 279 aaPredicted RBP16.2■□□□□ 0.18
CCHCR1-202ENST00000396263 CENPLQ8N0S6 344 aaPredicted RBP16.2■□□□□ 0.18
CCHCR1-202ENST00000396263 ZNF513Q8N8E2 541 aaPredicted RBP16.2■□□□□ 0.18
CCHCR1-202ENST00000396263 AGR3Q8TD06 166 aa16.2■□□□□ 0.18
CCHCR1-202ENST00000396263 MYLPFQ96A32 169 aa16.2■□□□□ 0.18
CCHCR1-202ENST00000396263 FCRL5Q96RD9 977 aa16.2■□□□□ 0.18
CCHCR1-202ENST00000396263 TBL1YQ9BQ87 522 aa16.2■□□□□ 0.18
CCHCR1-202ENST00000396263 VTI1BQ9UEU0 232 aa16.2■□□□□ 0.18
CCHCR1-202ENST00000396263 H3BNX3 289 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 PHGDHO43175 533 aaKnown RBP16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 GRID2O43424 1007 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 PIGNO95427 931 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 IGLV3-25P01717 112 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 TFEBP19484 476 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 FLT3LGP49771 235 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 AFF1P51825 1210 aaKnown RBP16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 PRKCZQ05513 592 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 EIF4EBP2Q13542 120 aaPredicted RBP16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 LSM12Q3MHD2 195 aaKnown RBP16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 TAF2Q6P1X5 1199 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 SETD3Q86TU7 594 aaPredicted RBP16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 RP9Q8TA86 221 aaKnown RBP16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 DQX1Q8TE96 717 aaKnown RBP16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 EBF3Q9H4W6 596 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 ZNF385DQ9H6B1 395 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 WDR55Q9H6Y2 383 aaPredicted RBP16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 STK39Q9UEW8 545 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 RUVBL2Q9Y230 463 aaKnown RBP16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 SERPINB5P36952 375 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 MAGEA8P43361 318 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 SFT2D3Q587I9 215 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 LRRC8EQ6NSJ5 796 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 C16orf89Q6UX73 402 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 BEND5Q7L4P6 421 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 TMC7Q7Z402 723 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 FSTL5Q8N475 847 aaPredicted RBP16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 GDPD5Q8WTR4 605 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 KCTD4Q8WVF5 259 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 RTP3Q9BQQ7 232 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 RHOBTB2Q9BYZ6 727 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 MIOSQ9NXC5 875 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 ARHGEF38Q9NXL2 777 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 CASP8AP2Q9UKL3 1982 aa16.19■□□□□ 0.18
CCHCR1-202ENST00000396263 GOLGA8QA0A0J9YX86 632 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 GOLGA8OA6NCC3 632 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 GOLGA8NF8WBI6 632 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 PEX1O43933 1283 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 ANXA9O76027 345 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 PIM1P11309 404 aaPredicted RBP16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 RAG1P15918 1043 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 TPP2P29144 1249 aaPredicted RBP16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 EPHA3P29320 983 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 RPL9P32969 192 aaKnown RBP16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 NAGLUP54802 743 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 RPL26P61254 145 aaKnown RBP16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 NSUN2Q08J23 767 aaKnown RBP eCLIP16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 TRIM32Q13049 653 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 LPCAT4Q643R3 524 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 ARHGAP12Q8IWW6 846 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 SPATA22Q8NHS9 363 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 USP33Q8TEY7 942 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 PTCD2Q8WV60 388 aaKnown RBP16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 RNF34Q969K3 372 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 MOCOSQ96EN8 888 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 SCYL1Q96KG9 808 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 SERPINI1Q99574 410 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 IL12RB2Q99665 862 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 MRM3Q9HC36 420 aaKnown RBP16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 VCX3AQ9NNX9 186 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 ZDHHC2Q9UIJ5 367 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 ACOT9Q9Y305 439 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 Q9Y3F1 56 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 MYLKQ15746 1914 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 MYADML2A6NDP7 307 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 RNASEH1O60930 286 aaKnown RBP16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 PENKP01210 267 aaPredicted RBP16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 SAT1P21673 171 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 PEX2P28328 305 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 HOXC13P31276 330 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 PPARGP37231 505 aaPredicted RBP16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 ARCN1P48444 511 aaKnown RBP16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 RAB10P61026 200 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 MRPS6P82932 125 aaKnown RBP16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 MSLNQ13421 630 aaPredicted RBP16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 LSAMPQ13449 338 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 DENND5AQ6IQ26 1287 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 FAM171BQ6P995 826 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 ARHGAP36Q6ZRI8 547 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 SNX32Q86XE0 403 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 SLC41A1Q8IVJ1 513 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 LSMEM2Q8N112 164 aa16.18■□□□□ 0.18
CCHCR1-202ENST00000396263 ATPAF2Q8N5M1 289 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms