RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 LRRC8DQ7L1W4 858 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 DENND6AQ8IWF6 608 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.99■□□□□ 0.31
NUP50-202ENST00000396096 CENPLQ8N0S6 344 aaPredicted RBP16.99■□□□□ 0.31
NUP50-202ENST00000396096 TTC9BQ8N6N2 239 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 ATAD1Q8NBU5 361 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 FBXO27Q8NI29 283 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 SPPL2BQ8TCT7 592 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 TADA1Q96BN2 335 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 TLR8Q9NR97 1041 aaKnown RBP16.99■□□□□ 0.31
NUP50-202ENST00000396096 SLC2A6Q9UGQ3 507 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 ACOT9Q9Y305 439 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 FAM95CA0A1B0GW59 222 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 HEATR9A2RTY3 570 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 F8W8V4 182 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 PHGDHO43175 533 aaKnown RBP16.99■□□□□ 0.31
NUP50-202ENST00000396096 TBC1D4O60343 1298 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 PAPSS2O95340 614 aaPredicted RBP16.99■□□□□ 0.31
NUP50-202ENST00000396096 SELPP16109 830 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 MAP2K2P36507 400 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 SLC1A2P43004 574 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 RING1Q06587 406 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 MTA1Q13330 715 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 CTBP1Q13363 440 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 MSLNQ13421 630 aaPredicted RBP16.99■□□□□ 0.31
NUP50-202ENST00000396096 THOC5Q13769 683 aaKnown RBP16.99■□□□□ 0.31
NUP50-202ENST00000396096 KPNB1Q14974 876 aaKnown RBP16.99■□□□□ 0.31
NUP50-202ENST00000396096 PSMD5Q16401 504 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 ALFQ53S48 1182 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 ACSBG2Q5FVE4 666 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 MARC1Q5VT66 337 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 SLC41A1Q8IVJ1 513 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 MFSD6LQ8IWD5 586 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 ZNF781Q8N8C0 355 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 GPR78Q96P69 363 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 CFHR5Q9BXR6 569 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 GPR62Q9BZJ7 368 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 DRC3Q9H069 523 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 STARD7Q9NQZ5 370 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 MARCH5Q9NX47 278 aa16.99■□□□□ 0.31
NUP50-202ENST00000396096 MTMR11A4FU01 709 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 ARVCFO00192 962 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 ENPP3O14638 875 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 CNTN5O94779 1100 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 MMP2P08253 660 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 HAPLN1P10915 354 aaPredicted RBP16.98■□□□□ 0.31
NUP50-202ENST00000396096 STMN1P16949 149 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 CPOXP36551 454 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 CHRNA4P43681 627 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 CD151P48509 253 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 NUMBP49757 651 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 GPR17Q13304 367 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 METTL21CQ5VZV1 264 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 FBXL22Q6P050 247 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 NET1Q7Z628 596 aaPredicted RBP16.98■□□□□ 0.31
NUP50-202ENST00000396096 TFAP2DQ7Z6R9 452 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 GALNT7Q86SF2 657 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 REM2Q8IYK8 340 aaPredicted RBP16.98■□□□□ 0.31
NUP50-202ENST00000396096 KCTD4Q8WVF5 259 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 RSRC1Q96IZ7 334 aaKnown RBP16.98■□□□□ 0.31
NUP50-202ENST00000396096 CASD1Q96PB1 797 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 OXCT2Q9BYC2 517 aaPredicted RBP16.98■□□□□ 0.31
NUP50-202ENST00000396096 NT5MQ9NPB1 228 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 MARCH2Q9P0N8 246 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 FBXO5Q9UKT4 447 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 RUVBL2Q9Y230 463 aaKnown RBP16.98■□□□□ 0.31
NUP50-202ENST00000396096 RAP2CQ9Y3L5 183 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 LRRC42Q9Y546 428 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 DNAH12Q6ZR08 3092 aa16.98■□□□□ 0.31
NUP50-202ENST00000396096 A0A087X1B8 175 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 J3KR12 359 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 TK2O00142 265 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 VNN2O95498 520 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 ZDHHC11BP0C7U3 371 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 PRDX6P30041 224 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 SERPINH1P50454 418 aaKnown RBP16.97■□□□□ 0.31
NUP50-202ENST00000396096 POU4F1Q01851 419 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 IL10RBQ08334 325 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 SLC10A7Q0GE19 358 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 TSNAXIP1Q2TAA8 658 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 PARP15Q460N3 678 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 CMPK2Q5EBM0 449 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 LRRC8EQ6NSJ5 796 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 NEPROQ6NW34 567 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 SCUBE1Q8IWY4 988 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 ABI1Q8IZP0 508 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 CALML6Q8TD86 181 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 WDR60Q8WVS4 1066 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 IGSF8Q969P0 613 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 ILKAPQ9H0C8 392 aaPredicted RBP16.97■□□□□ 0.31
NUP50-202ENST00000396096 COG4Q9H9E3 785 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 SP110Q9HB58 689 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 CPSF2Q9P2I0 782 aaKnown RBP16.97■□□□□ 0.31
NUP50-202ENST00000396096 MRPL42Q9Y6G3 142 aaKnown RBP16.97■□□□□ 0.31
NUP50-202ENST00000396096 PSMG1O95456 288 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 TAF10Q12962 218 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 TSTD2Q5T7W7 516 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 RASIP1Q5U651 963 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 ZNF470Q6ECI4 717 aa16.97■□□□□ 0.31
NUP50-202ENST00000396096 CEP97Q8IW35 865 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms