RNA–Protein interactions for RNA: ENST00000395853.5

MSH5-205, Transcript of mutS homolog 5, humanhuman

TSL 2 BASIC

Gene MSH5, Length 2,704 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-205ENST00000395853 ATG14Q6ZNE5 492 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 SLC22A16Q86VW1 577 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 TMEM126BQ8IUX1 230 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 SYTL5Q8TDW5 730 aaPredicted RBP9.01□□□□□ -0.97
MSH5-205ENST00000395853 RBM18Q96H35 190 aaKnown RBP9.01□□□□□ -0.97
MSH5-205ENST00000395853 TRIM9Q9C026 710 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 VPS11Q9H270 941 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 CDC42EP4Q9H3Q1 356 aaKnown RBP9.01□□□□□ -0.97
MSH5-205ENST00000395853 BLOC1S4Q9NUP1 217 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 ARMCX1Q9P291 453 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 TINAGQ9UJW2 476 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 PCDHA1Q9Y5I3 950 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 FCER1AP12319 257 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 OPRL1P41146 370 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 LAMC2Q13753 1193 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 PPP1R18Q6NYC8 613 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 TMEM179Q6ZVK1 233 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 STX12Q86Y82 276 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 ZC3H7AQ8IWR0 971 aaKnown RBP9.01□□□□□ -0.97
MSH5-205ENST00000395853 CCDC116Q8IYX3 515 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 SIX6OS1Q8N1H7 587 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 GRIN3AQ8TCU5 1115 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 DENND1AQ8TEH3 1009 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 DCAF4Q8WV16 495 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 HAS1Q92839 578 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 NCLNQ969V3 563 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 EEF2KMTQ96G04 330 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 SH3YL1Q96HL8 342 aaPredicted RBP9.01□□□□□ -0.97
MSH5-205ENST00000395853 OXNAD1Q96HP4 312 aaPredicted RBP9.01□□□□□ -0.97
MSH5-205ENST00000395853 C7orf25Q9BPX7 421 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 TRIM8Q9BZR9 551 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 DHX33Q9H6R0 707 aaKnown RBP9.01□□□□□ -0.97
MSH5-205ENST00000395853 PAK6Q9NQU5 681 aaPredicted RBP9.01□□□□□ -0.97
MSH5-205ENST00000395853 HOMER2Q9NSB8 354 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 PNPLA3Q9NST1 481 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 POLR3BQ9NW08 1133 aaPredicted RBP9.01□□□□□ -0.97
MSH5-205ENST00000395853 ENPP5Q9UJA9 477 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 PSMD13Q9UNM6 376 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 RAD54BQ9Y620 910 aa9.01□□□□□ -0.97
MSH5-205ENST00000395853 HMX3A6NHT5 357 aa9□□□□□ -0.97
MSH5-205ENST00000395853 PRPF4O43172 522 aaKnown RBP eCLIP9□□□□□ -0.97
MSH5-205ENST00000395853 ENTPD3O75355 529 aa9□□□□□ -0.97
MSH5-205ENST00000395853 NDUFB10O96000 172 aa9□□□□□ -0.97
MSH5-205ENST00000395853 TP53P04637 393 aaPredicted RBP9□□□□□ -0.97
MSH5-205ENST00000395853 NCAM1P13591 858 aa9□□□□□ -0.97
MSH5-205ENST00000395853 PIK3R1P27986 724 aa9□□□□□ -0.97
MSH5-205ENST00000395853 ZNF76P36508 570 aa9□□□□□ -0.97
MSH5-205ENST00000395853 RPL21P46778 160 aaKnown RBP9□□□□□ -0.97
MSH5-205ENST00000395853 SERPINH1P50454 418 aaKnown RBP9□□□□□ -0.97
MSH5-205ENST00000395853 FXR2P51116 673 aaKnown RBP eCLIP9□□□□□ -0.97
MSH5-205ENST00000395853 EIF3EP60228 445 aaKnown RBP9□□□□□ -0.97
MSH5-205ENST00000395853 ASIC1P78348 528 aa9□□□□□ -0.97
MSH5-205ENST00000395853 ORC2Q13416 577 aaPredicted RBP9□□□□□ -0.97
MSH5-205ENST00000395853 ECM1Q16610 540 aa9□□□□□ -0.97
MSH5-205ENST00000395853 ZNF792Q3KQV3 632 aa9□□□□□ -0.97
MSH5-205ENST00000395853 ZNF568Q3ZCX4 644 aa9□□□□□ -0.97
MSH5-205ENST00000395853 ZFP69Q49AA0 526 aa9□□□□□ -0.97
MSH5-205ENST00000395853 GARNL3Q5VVW2 1013 aa9□□□□□ -0.97
MSH5-205ENST00000395853 KRT80Q6KB66 452 aa9□□□□□ -0.97
MSH5-205ENST00000395853 GPAT2Q6NUI2 795 aa9□□□□□ -0.97
MSH5-205ENST00000395853 DCUN1D2Q6PH85 259 aa9□□□□□ -0.97
MSH5-205ENST00000395853 CATSPER4Q7RTX7 472 aa9□□□□□ -0.97
MSH5-205ENST00000395853 KCNK18Q7Z418 384 aa9□□□□□ -0.97
MSH5-205ENST00000395853 TLK2Q86UE8 772 aa9□□□□□ -0.97
MSH5-205ENST00000395853 RNF135Q8IUD6 432 aa9□□□□□ -0.97
MSH5-205ENST00000395853 CHERPQ8IWX8 916 aaKnown RBP9□□□□□ -0.97
MSH5-205ENST00000395853 ST13P5Q8NFI4 369 aaPredicted RBP9□□□□□ -0.97
MSH5-205ENST00000395853 PHOSPHO2Q8TCD6 241 aa9□□□□□ -0.97
MSH5-205ENST00000395853 CHAC2Q8WUX2 184 aa9□□□□□ -0.97
MSH5-205ENST00000395853 AKAP1Q92667 903 aaKnown RBP eCLIP9□□□□□ -0.97
MSH5-205ENST00000395853 NKD2Q969F2 451 aaPredicted RBP9□□□□□ -0.97
MSH5-205ENST00000395853 FBXW5Q969U6 566 aa9□□□□□ -0.97
MSH5-205ENST00000395853 PHF21AQ96BD5 680 aa9□□□□□ -0.97
MSH5-205ENST00000395853 MCRS1Q96EZ8 462 aa9□□□□□ -0.97
MSH5-205ENST00000395853 CALML4Q96GE6 196 aa9□□□□□ -0.97
MSH5-205ENST00000395853 P2RX7Q99572 595 aaKnown RBP9□□□□□ -0.97
MSH5-205ENST00000395853 TMEM120AQ9BXJ8 343 aa9□□□□□ -0.97
MSH5-205ENST00000395853 NUSAP1Q9BXS6 441 aaKnown RBP9□□□□□ -0.97
MSH5-205ENST00000395853 UNC93B1Q9H1C4 597 aa9□□□□□ -0.97
MSH5-205ENST00000395853 STN1Q9H668 368 aaKnown RBP9□□□□□ -0.97
MSH5-205ENST00000395853 NANOGQ9H9S0 305 aa9□□□□□ -0.97
MSH5-205ENST00000395853 TUFT1Q9NNX1 390 aa9□□□□□ -0.97
MSH5-205ENST00000395853 TAGLN3Q9UI15 199 aa9□□□□□ -0.97
MSH5-205ENST00000395853 LAMP5Q9UJQ1 280 aa9□□□□□ -0.97
MSH5-205ENST00000395853 NAALADL1Q9UQQ1 740 aa9□□□□□ -0.97
MSH5-205ENST00000395853 ARHGEF37A1IGU5 675 aa9□□□□□ -0.97
MSH5-205ENST00000395853 RAB19A4D1S5 217 aa9□□□□□ -0.97
MSH5-205ENST00000395853 GRXCR2A6NFK2 248 aa9□□□□□ -0.97
MSH5-205ENST00000395853 PODXLO00592 558 aa9□□□□□ -0.97
MSH5-205ENST00000395853 DEAF1O75398 565 aaPredicted RBP9□□□□□ -0.97
MSH5-205ENST00000395853 DAB1O75553 588 aa9□□□□□ -0.97
MSH5-205ENST00000395853 SPAG6O75602 509 aa9□□□□□ -0.97
MSH5-205ENST00000395853 CLEC2LP0C7M8 214 aa9□□□□□ -0.97
MSH5-205ENST00000395853 KRT13P13646 458 aa9□□□□□ -0.97
MSH5-205ENST00000395853 EIF2AK2P19525 551 aaKnown RBP9□□□□□ -0.97
MSH5-205ENST00000395853 ABCB4P21439 1286 aa9□□□□□ -0.97
MSH5-205ENST00000395853 PTX3P26022 381 aaPredicted RBP9□□□□□ -0.97
MSH5-205ENST00000395853 CDKL1Q00532 357 aa9□□□□□ -0.97
MSH5-205ENST00000395853 IFITM3Q01628 133 aa9□□□□□ -0.97
MSH5-205ENST00000395853 UBE3AQ05086 875 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms