RNA–Protein interactions for RNA: ENST00000394083.6

GAPVD1-204, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 5 BASIC

Gene GAPVD1, Length 4,747 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-204ENST00000394083 TMEM120AQ9BXJ8 343 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 MANSC1Q9H8J5 431 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 TMEM248Q9NWD8 314 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 OPHN1O60890 802 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 STC2O76061 302 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 C2P06681 752 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 VIMP08670 466 aaKnown RBP8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 SLC8A3P57103 927 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 LMNB2Q03252 620 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 GPR17Q13304 367 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 POLD3Q15054 466 aaPredicted RBP8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 GKAP1Q5VSY0 366 aaPredicted RBP8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 FAM171A1Q5VUB5 890 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 HEATR6Q6AI08 1181 aaKnown RBP8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 FUT10Q6P4F1 479 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 NLRP9Q7RTR0 991 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 TBC1D1Q86TI0 1168 aaPredicted RBP8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 PDIK1LQ8N165 341 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 SGSM3Q96HU1 749 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 TTC25Q96NG3 672 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 FCRL5Q96RD9 977 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 CYTH2Q99418 400 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 COPG2Q9UBF2 871 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 GIMAP2Q9UG22 337 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 EML5Q05BV3 1969 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 MATN3O15232 486 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 DLX3O60479 287 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 TSHRP16473 764 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 METAP1P53582 386 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 PDE1BQ01064 536 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 SERINC3Q13530 473 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 TFDP2Q14188 446 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 PPP2R5DQ14738 602 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 SLC5A9Q2M3M2 681 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 FAM91A1Q658Y4 838 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 RAP1GAP2Q684P5 730 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 CACNA2D3Q8IZS8 1091 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 KIRREL3Q8IZU9 778 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 KDM1BQ8NB78 822 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 ST13P5Q8NFI4 369 aaPredicted RBP8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 MYO19Q96H55 970 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 TEX37Q96LM6 180 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 PANX3Q96QZ0 392 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 NDNQ99608 321 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.56□□□□□ -1.045e-11■■■■□ 24
GAPVD1-204ENST00000394083 ECT2Q9H8V3 914 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 EBF2Q9HAK2 575 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 WASF2Q9Y6W5 498 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 ASPDHA6ND91 283 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 HACD1B0YJ81 288 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 H3BNX3 289 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 MZF1P28698 734 aaPredicted RBP8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 PRDX3P30048 256 aaKnown RBP8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 CPA2P48052 419 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 SREBF2Q12772 1141 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 CYTH1Q15438 398 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 FRMD7Q6ZUT3 714 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 OR13C4Q8NGS5 318 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 EXOC2Q96KP1 924 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 PITPNM3Q9BZ71 974 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 SMG9Q9H0W8 520 aaKnown RBP8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 PCYT1BQ9Y5K3 369 aaPredicted RBP8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 RPS6KL1Q9Y6S9 549 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 CSMD1Q96PZ7 3565 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 PCDH15Q96QU1 1955 aa8.56□□□□□ -1.04
GAPVD1-204ENST00000394083 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 ODC1P11926 461 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 NQO1P15559 274 aaKnown RBP8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 OR1G1P47890 313 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 IDH3AP50213 366 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 TAS2R39P59534 338 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 DEFB115Q30KQ5 88 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 UGT3A1Q6NUS8 523 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 C8orf82Q6P1X6 216 aaPredicted RBP8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 NDUFAF2Q8N183 169 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 OR7D4Q8NG98 312 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 PLEKHG4BQ96PX9 1271 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 RUFY1Q96T51 708 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 NRTNQ99748 197 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 KLC4Q9NSK0 619 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 HCFC1R1Q9NWW0 138 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 GTSE1Q9NYZ3 720 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 VGLL3A8MV65 326 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 FZD6O60353 706 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 TOMM70O94826 608 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 SPATA31D3P0C874 917 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 ATN1P54259 1190 aaPredicted RBP8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 FOXB2Q5VYV0 432 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 SPATA31D4Q6ZUB0 917 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 PCGF5Q86SE9 256 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 CCDC197Q8NCU1 140 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 CABS1Q96KC9 395 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 ACBD3Q9H3P7 528 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 GLOD4Q9HC38 313 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 GULP1Q9UBP9 304 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 LNPEPQ9UIQ6 1025 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 STOML2Q9UJZ1 356 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 MGAQ8IWI9 3026 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 MOXD2PA6NHM9 499 aa8.55□□□□□ -1.04
GAPVD1-204ENST00000394083 TM9SF1O15321 606 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms