RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 MX2P20592 715 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 ITPKAP23677 461 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 MPLP40238 635 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 RENBPP51606 427 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 GALNT2Q10471 571 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 LBRQ14739 615 aaKnown RBP19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 DCAF12L1Q5VU92 463 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 SYT12Q8IV01 421 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 BBS5Q8N3I7 341 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 OR2T34Q8NGX1 318 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 ARRDC3Q96B67 414 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 RBM41Q96IZ5 413 aaKnown RBP19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 ZNF830Q96NB3 372 aaPredicted RBP19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 OSBPL1AQ9BXW6 950 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 KDM4CQ9H3R0 1056 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 C6orf106Q9H6K1 298 aaPredicted RBP19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 VPS45Q9NRW7 570 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 SEPT3Q9UH03 358 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 EVLQ9UI08 416 aaPredicted RBP19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 AMFRQ9UKV5 643 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 PCDHA3Q9Y5H8 950 aa19.28■□□□□ 0.68
PDLIM7-204ENST00000393546 GRID2IPA4D2P6 1211 aa19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 CCDC175P0C221 793 aa19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 GKP32189 559 aa19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 CTNNA1P35221 906 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 GARSP41250 739 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 CSNK1DP48730 415 aa19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 CCZ1BP86790 482 aa19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 CCZ1P86791 482 aaPredicted RBP19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 GBE1Q04446 702 aa19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 NSUN2Q08J23 767 aaKnown RBP eCLIP19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 TFDP2Q14188 446 aa19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 GRM3Q14832 879 aa19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 CSRP2Q16527 193 aa19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 PLA2G2CQ5R387 149 aa19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 SLC9A4Q6AI14 798 aa19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 NCEH1Q6PIU2 408 aa19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 SPOCD1Q6ZMY3 1216 aa19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 ERN2Q76MJ5 926 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 LRRC57Q8N9N7 239 aa19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 TSEN2Q8NCE0 465 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 EXD1Q8NHP7 514 aa19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 FAM131CQ96AQ9 280 aa19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 EXOC2Q96KP1 924 aa19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 HDAC8Q9BY41 377 aa19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 CPEB1Q9BZB8 566 aaKnown RBP19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 SEMA4GQ9NTN9 838 aa19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 PILRBQ9UKJ0 227 aa19.27■□□□□ 0.68
PDLIM7-204ENST00000393546 TBC1D3DA0A087WVF3 549 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 TBC1D3IA0A087WXS9 549 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 TBC1D3EA0A087X179 549 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 TBC1D3KA0A087X1G2 549 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 CCDC66A2RUB6 948 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 TBC1D3FA6NER0 549 aaPredicted RBP19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 TBC1D3LB9A6J9 549 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 FOXD2O60548 495 aaPredicted RBP19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 FSBPO95073 299 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 TBC1D3HP0C7X1 549 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 ZNF806P0C7X5 589 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 CCNCP24863 283 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 ITGB7P26010 798 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 CTNNA2P26232 953 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 HOXD12P35452 270 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 CDKN2BP42772 138 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 MARCKSL1P49006 195 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 ADPRHP54922 357 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 SLC10A7Q0GE19 358 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 SLC10A2Q12908 348 aaPredicted RBP19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 ZNF235Q14590 738 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 CCDC6Q16204 474 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 TAZQ16635 292 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 ZNF805Q5CZA5 627 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 TFDP3Q5H9I0 405 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 MARC1Q5VT66 337 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 KIAA0895LQ68EN5 471 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 TBC1D3GQ6DHY5 549 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 TBC1D3CQ6IPX1 549 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 TIGD7Q6NT04 549 aaPredicted RBP19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 FBXL19Q6PCT2 694 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 GDPD4Q6W3E5 623 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 PEX26Q7Z412 305 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 SRLQ86TD4 932 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 CCDC50Q8IVM0 306 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 TBC1D3Q8IZP1 549 aaPredicted RBP19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 PLD5Q8N7P1 536 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 CCNYQ8ND76 341 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 DNASE2BQ8WZ79 361 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 KRT35Q92764 455 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 TSGA13Q96PP4 275 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 PSKH2Q96QS6 385 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 PARD6AQ9NPB6 346 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 DTLQ9NZJ0 730 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 GUCA1BQ9UMX6 200 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 HEY1Q9Y5J3 304 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 WDR87Q6ZQQ6 2873 aa19.26■□□□□ 0.67
PDLIM7-204ENST00000393546 RNF103O00237 685 aa19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 PLRG1O43660 514 aaKnown RBP19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 MAP3K6O95382 1288 aa19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 PEX11BO96011 259 aa19.25■□□□□ 0.67
PDLIM7-204ENST00000393546 UGT2B4P06133 528 aa19.25■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms