RNA–Protein interactions for RNA: ENST00000392901.10

SHTN1-203, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHTN1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-203ENST00000392901 SPRED2Q7Z698 418 aa17.9■□□□□ 0.46
SHTN1-203ENST00000392901 ARRDC2Q8TBH0 407 aa17.9■□□□□ 0.46
SHTN1-203ENST00000392901 ADAMTS19Q8TE59 1207 aa17.9■□□□□ 0.46
SHTN1-203ENST00000392901 POF1BQ8WVV4 589 aa17.9■□□□□ 0.46
SHTN1-203ENST00000392901 PTPRN2Q92932 1015 aa17.9■□□□□ 0.46
SHTN1-203ENST00000392901 BHMTQ93088 406 aa17.9■□□□□ 0.46
SHTN1-203ENST00000392901 ATXN7L3BQ96GX2 97 aa17.9■□□□□ 0.46
SHTN1-203ENST00000392901 SRPK1Q96SB4 655 aaKnown RBP17.9■□□□□ 0.46
SHTN1-203ENST00000392901 SEMA3CQ99985 751 aa17.9■□□□□ 0.46
SHTN1-203ENST00000392901 CORO1BQ9BR76 489 aa17.9■□□□□ 0.46
SHTN1-203ENST00000392901 POLR1EQ9GZS1 481 aaKnown RBP17.9■□□□□ 0.46
SHTN1-203ENST00000392901 PDFQ9HBH1 243 aa17.9■□□□□ 0.46
SHTN1-203ENST00000392901 A0A1W2PRU2 124 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 CCL16O15467 120 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 EDF1O60869 148 aaKnown RBP17.89■□□□□ 0.45
SHTN1-203ENST00000392901 GLUD1P00367 558 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 DHRS4L1P0CG22 281 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 MYL4P12829 197 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 GP5P40197 560 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 OXCT1P55809 520 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 SEPT6Q14141 434 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 TRPM8Q7Z2W7 1104 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 STRA8Q7Z7C7 330 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 TMC8Q8IU68 726 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 NDUFAF2Q8N183 169 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 ELMOD1Q8N336 334 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 CCDC63Q8NA47 563 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 PPHLN1Q8NEY8 458 aaKnown RBP17.89■□□□□ 0.45
SHTN1-203ENST00000392901 SP7Q8TDD2 431 aaPredicted RBP17.89■□□□□ 0.45
SHTN1-203ENST00000392901 CPNE1Q99829 537 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 RASSF4Q9H2L5 321 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 RETREG1Q9H6L5 497 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 ATP13A1Q9HD20 1204 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 VPS45Q9NRW7 570 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 IARS2Q9NSE4 1012 aaKnown RBP17.89■□□□□ 0.45
SHTN1-203ENST00000392901 NRG2O14511 850 aaPredicted RBP17.89■□□□□ 0.45
SHTN1-203ENST00000392901 TBL1XO60907 577 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 OLFM2O95897 454 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 ITGA2BP08514 1039 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 ALADP13716 330 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 PDE1BQ01064 536 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 STXBP5Q5T5C0 1151 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 ESRP1Q6NXG1 681 aaKnown RBP17.89■□□□□ 0.45
SHTN1-203ENST00000392901 POTEHQ6S545 545 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 CHST9Q7L1S5 443 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 CARNMT1Q8N4J0 409 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 MRPL43Q8N983 215 aaKnown RBP17.89■□□□□ 0.45
SHTN1-203ENST00000392901 HERVK_113Q902F9 699 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 C17orf80Q9BSJ5 609 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 LRRC3Q9BY71 257 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 MUC3BQ9H195 1237 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 VPS11Q9H270 941 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 KDM4CQ9H3R0 1056 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 ARL2BPQ9Y2Y0 163 aa17.89■□□□□ 0.45
SHTN1-203ENST00000392901 ILVBLA1L0T0 632 aa17.88■□□□□ 0.45
SHTN1-203ENST00000392901 C2orf71A6NGG8 1288 aa17.88■□□□□ 0.45
SHTN1-203ENST00000392901 CBX4O00257 560 aa17.88■□□□□ 0.45
SHTN1-203ENST00000392901 TOP3BO95985 862 aaKnown RBP17.88■□□□□ 0.45
SHTN1-203ENST00000392901 C1RP00736 705 aa17.88■□□□□ 0.45
SHTN1-203ENST00000392901 CCNFP41002 786 aa17.88■□□□□ 0.45
SHTN1-203ENST00000392901 RNF219Q5W0B1 726 aaPredicted RBP17.88■□□□□ 0.45
SHTN1-203ENST00000392901 ZNF449Q6P9G9 518 aa17.88■□□□□ 0.45
SHTN1-203ENST00000392901 SETD3Q86TU7 594 aaPredicted RBP17.88■□□□□ 0.45
SHTN1-203ENST00000392901 PPM1EQ8WY54 764 aa17.88■□□□□ 0.45
SHTN1-203ENST00000392901 STARD13Q9Y3M8 1113 aa17.88■□□□□ 0.45
SHTN1-203ENST00000392901 TCAF1Q9Y4C2 921 aa17.88■□□□□ 0.45
SHTN1-203ENST00000392901 ALPK3Q96L96 1907 aa17.88■□□□□ 0.45
SHTN1-203ENST00000392901 H0Y626 953 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 TPP1O14773 563 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 KDELR3O43731 214 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 GREM1O60565 184 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 FSBPO95073 299 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 ALDOAP04075 364 aaKnown RBP17.87■□□□□ 0.45
SHTN1-203ENST00000392901 ABCG1P45844 678 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 TNK2Q07912 1038 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 LACTB2Q53H82 288 aaPredicted RBP17.87■□□□□ 0.45
SHTN1-203ENST00000392901 GRTP1Q5TC63 336 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 TIFABQ6ZNK6 161 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 OTOAQ7RTW8 1153 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 MICALL1Q8N3F8 863 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 SPPL3Q8TCT6 385 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 ATP2A3Q93084 1043 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 GRAMD1AQ96CP6 724 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 TMA16Q96EY4 203 aaKnown RBP17.87■□□□□ 0.45
SHTN1-203ENST00000392901 RMDN2Q96LZ7 410 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 ZNF599Q96NL3 588 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 UBA2Q9UBT2 640 aaPredicted RBP17.87■□□□□ 0.45
SHTN1-203ENST00000392901 SLC2A6Q9UGQ3 507 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 STOML2Q9UJZ1 356 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 TBC1D30Q9Y2I9 924 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 PLLPQ9Y342 182 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 IRAK3Q9Y616 596 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 VAPBO95292 243 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 FRG1Q14331 258 aaKnown RBP17.87■□□□□ 0.45
SHTN1-203ENST00000392901 CNGA3Q16281 694 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 FSCBQ5H9T9 825 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 PPM1LQ5SGD2 360 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 CXorf57Q6NSI4 855 aaKnown RBP17.87■□□□□ 0.45
SHTN1-203ENST00000392901 BBS5Q8N3I7 341 aa17.87■□□□□ 0.45
SHTN1-203ENST00000392901 PHOSPHO2Q8TCD6 241 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms