RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 CSPG4P5Q96PW8 444 aa19.27■□□□□ 0.67
CCDC50-202ENST00000392456 CTRCQ99895 268 aa19.27■□□□□ 0.67
CCDC50-202ENST00000392456 GID8Q9NWU2 228 aa19.27■□□□□ 0.67
CCDC50-202ENST00000392456 ZFP69BQ9UJL9 534 aa19.27■□□□□ 0.67
CCDC50-202ENST00000392456 RBMX2Q9Y388 322 aaKnown RBP19.27■□□□□ 0.67
CCDC50-202ENST00000392456 F8W8V4 182 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 H7C4K7 107 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 APOC4-APOC2K7ER74 178 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 MSI1O43347 362 aaKnown RBP19.26■□□□□ 0.67
CCDC50-202ENST00000392456 APOC2P02655 101 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 ZNF12P17014 697 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 MAGEA11P43364 429 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 STT3AP46977 705 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 SLC8B1Q6J4K2 584 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 GSTA5Q7RTV2 222 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 OR7G1Q8NGA0 311 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 NKD2Q969F2 451 aaPredicted RBP19.26■□□□□ 0.67
CCDC50-202ENST00000392456 ZFRQ96KR1 1074 aaKnown RBP19.26■□□□□ 0.67
CCDC50-202ENST00000392456 BIRC8Q96P09 236 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 ROPN1BQ9BZX4 212 aaPredicted RBP19.26■□□□□ 0.67
CCDC50-202ENST00000392456 ROPN1Q9HAT0 212 aaPredicted RBP19.26■□□□□ 0.67
CCDC50-202ENST00000392456 ASIC3Q9UHC3 531 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 PATJQ8NI35 1801 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 RIPK2O43353 540 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 VCLP18206 1134 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 DNAJB2P25686 324 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 KLRC2P26717 231 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 ADRA1BP35368 520 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 RPL26P61254 145 aaKnown RBP19.26■□□□□ 0.67
CCDC50-202ENST00000392456 KCNC4Q03721 635 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 SLC10A2Q12908 348 aaPredicted RBP19.26■□□□□ 0.67
CCDC50-202ENST00000392456 NIPAL1Q6NVV3 410 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 DRICH1Q6PGQ1 229 aaPredicted RBP19.26■□□□□ 0.67
CCDC50-202ENST00000392456 ANKMY2Q8IV38 441 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 FAF2Q96CS3 445 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 TMEM169Q96HH4 297 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 OSBPL6Q9BZF3 934 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 MYO7AQ13402 2215 aa19.26■□□□□ 0.67
CCDC50-202ENST00000392456 ZNF638Q14966 1978 aaKnown RBP19.26■□□□□ 0.67
CCDC50-202ENST00000392456 ZWINTO95229 277 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 SOD2P04179 222 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 LINC00271P0C7V0 271 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 HAPLN1P10915 354 aaPredicted RBP19.25■□□□□ 0.67
CCDC50-202ENST00000392456 ATF6P18850 670 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 GBE1Q04446 702 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 PTK6Q13882 451 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 SLC45A4Q5BKX6 768 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 SLC9A4Q6AI14 798 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 RAPH1Q70E73 1250 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 UNC45BQ8IWX7 931 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 CMTR2Q8IYT2 770 aaKnown RBP19.25■□□□□ 0.67
CCDC50-202ENST00000392456 C7orf61Q8IZ16 206 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 MCUR1Q96AQ8 359 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 PGAP3Q96FM1 320 aaPredicted RBP19.25■□□□□ 0.67
CCDC50-202ENST00000392456 RUNDC3BQ96NL0 473 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 ZNF670Q9BS34 389 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 EHD1Q9H4M9 534 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 GMIPQ9P107 970 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 THEGQ9P2T0 379 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 KLHL3Q9UH77 587 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 FBXW11Q9UKB1 542 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 AK5Q9Y6K8 562 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 C15orf38-AP3S2A0A0A6YYH1 394 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 PFDN6O15212 129 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 SEC24AO95486 1093 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 TBX18O95935 607 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 FGBP02675 491 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 PRKACBP22694 351 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 TCEA1P23193 301 aaKnown RBP19.25■□□□□ 0.67
CCDC50-202ENST00000392456 BTBD8Q5XKL5 378 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 ARPINQ7Z6K5 226 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 LZTR1Q8N653 840 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 ALLCQ8N6M5 410 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 SPPL2BQ8TCT7 592 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.25■□□□□ 0.67
CCDC50-202ENST00000392456 PLK2Q9NYY3 685 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 MTRF1LQ9UGC7 380 aaKnown RBP19.25■□□□□ 0.67
CCDC50-202ENST00000392456 SCML2Q9UQR0 700 aa19.25■□□□□ 0.67
CCDC50-202ENST00000392456 GYG2O15488 501 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 BAIAP3O94812 1187 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 GJB5O95377 273 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 IFNB1P01574 187 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 EIF3EP60228 445 aaKnown RBP19.24■□□□□ 0.67
CCDC50-202ENST00000392456 CD300CQ08708 224 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 EIF4EBP2Q13542 120 aaPredicted RBP19.24■□□□□ 0.67
CCDC50-202ENST00000392456 ANKRD20A4Q4UJ75 823 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 SFT2D3Q587I9 215 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 TMEM240Q5SV17 173 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 TMTC4Q5T4D3 741 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 MAMSTRQ6ZN01 415 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 DENND5BQ6ZUT9 1274 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 PTCD3Q96EY7 689 aaKnown RBP19.24■□□□□ 0.67
CCDC50-202ENST00000392456 PWWP2AQ96N64 755 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 GRIP2Q9C0E4 1043 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 ABCC13Q9NSE7 274 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 TBC1D23Q9NUY8 699 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 PHTF1Q9UMS5 762 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.24■□□□□ 0.67
CCDC50-202ENST00000392456 EFCAB14O75071 495 aa19.24■□□□□ 0.67
CCDC50-202ENST00000392456 HAUS5O94927 633 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms