RNA–Protein interactions for RNA: ENST00000392334.6

CSNK1D-203, Transcript of casein kinase 1 delta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CSNK1D, Length 2,047 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-203ENST00000392334 CPOXP36551 454 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 TUFMP49411 452 aaKnown RBP20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 ARHGAP8P85298 464 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 NAB1Q13506 487 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 MROH9Q5TGP6 573 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 WDR75Q8IWA0 830 aaKnown RBP20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 MPP5Q8N3R9 675 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 CCDC28BQ9BUN5 200 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 FAM96AQ9H5X1 160 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 PDP2Q9P2J9 529 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 RCOR3Q9P2K3 495 aaPredicted RBP20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 SOX13Q9UN79 622 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 MAD1L1Q9Y6D9 718 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 ZNF638Q14966 1978 aaKnown RBP20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 ENO4A6NNW6 628 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 TEX28O15482 410 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 SMIM24O75264 130 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 CRABP2P29373 138 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 KDSRQ06136 332 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 MBLAC2Q68D91 279 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 ARHGAP18Q8N392 663 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 RILPQ96NA2 401 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 SH3GL3Q99963 347 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 THTPAQ9BU02 230 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 ARHGEF38Q9NXL2 777 aa20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 YBX2Q9Y2T7 364 aaKnown RBP20.19■□□□□ 0.82
CSNK1D-203ENST00000392334 REV3LO60673 3130 aa20.18■□□□□ 0.82
CSNK1D-203ENST00000392334 DCLK1O15075 740 aa20.18■□□□□ 0.82
CSNK1D-203ENST00000392334 GLRA3O75311 464 aa20.18■□□□□ 0.82
CSNK1D-203ENST00000392334 KLHL2O95198 593 aa20.18■□□□□ 0.82
CSNK1D-203ENST00000392334 KITP10721 976 aa20.18■□□□□ 0.82
CSNK1D-203ENST00000392334 ALDH18A1P54886 795 aaKnown RBP20.18■□□□□ 0.82
CSNK1D-203ENST00000392334 SARNPP82979 210 aaKnown RBP20.18■□□□□ 0.82
CSNK1D-203ENST00000392334 NIPAL4Q0D2K0 466 aa20.18■□□□□ 0.82
CSNK1D-203ENST00000392334 FASTKD1Q53R41 847 aaKnown RBP20.18■□□□□ 0.82
CSNK1D-203ENST00000392334 RABGAP1LQ5R372 815 aa20.18■□□□□ 0.82
CSNK1D-203ENST00000392334 CCNYQ8ND76 341 aa20.18■□□□□ 0.82
CSNK1D-203ENST00000392334 PIWIL2Q8TC59 973 aaKnown RBP20.18■□□□□ 0.82
CSNK1D-203ENST00000392334 FCRL2Q96LA5 508 aaPredicted RBP20.18■□□□□ 0.82
CSNK1D-203ENST00000392334 ZNF512Q96ME7 567 aaPredicted RBP20.18■□□□□ 0.82
CSNK1D-203ENST00000392334 SERPINB11Q96P15 392 aa20.18■□□□□ 0.82
CSNK1D-203ENST00000392334 NDE1Q9NXR1 346 aa20.18■□□□□ 0.82
CSNK1D-203ENST00000392334 F5H423 210 aaPredicted RBP20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 PRRG1O14668 218 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 DNAJB1P25685 340 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 TEDDM1Q5T9Z0 273 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 SLC30A9Q6PML9 568 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 NPWQ8N729 165 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 SPDYE1Q8NFV5 336 aaPredicted RBP20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 ZFAND2BQ8WV99 257 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 EPAS1Q99814 870 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 EBF4Q9BQW3 602 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 CEP41Q9BYV8 373 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 ZBP1Q9H171 429 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 MARCOQ9UEW3 520 aaPredicted RBP20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 EMCNQ9ULC0 261 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 A0A088AWK7 358 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 TLR5O60602 858 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 FGF3P11487 239 aaPredicted RBP20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 MYL4P12829 197 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 FDFT1P37268 417 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 ALDH1A3P47895 512 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 TBX4P57082 545 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 ERVFC1P60507 584 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 ZNF778Q96MU6 729 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 FAM192AQ9GZU8 254 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 CERS4Q9HA82 394 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 MARCH2Q9P0N8 246 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 TLR6Q9Y2C9 796 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 YIPF1Q9Y548 306 aa20.17■□□□□ 0.82
CSNK1D-203ENST00000392334 COL4A4P53420 1690 aaPredicted RBP20.16■□□□□ 0.82
CSNK1D-203ENST00000392334 CARNS1A5YM72 827 aa20.16■□□□□ 0.82
CSNK1D-203ENST00000392334 ALOX15P16050 662 aaPredicted RBP20.16■□□□□ 0.82
CSNK1D-203ENST00000392334 TWF1Q12792 350 aa20.16■□□□□ 0.82
CSNK1D-203ENST00000392334 TAF12Q16514 161 aa20.16■□□□□ 0.82
CSNK1D-203ENST00000392334 INSCQ1MX18 579 aa20.16■□□□□ 0.82
CSNK1D-203ENST00000392334 C1orf146Q5VVC0 180 aa20.16■□□□□ 0.82
CSNK1D-203ENST00000392334 TMC7Q7Z402 723 aa20.16■□□□□ 0.82
CSNK1D-203ENST00000392334 CCNJLQ8IV13 435 aa20.16■□□□□ 0.82
CSNK1D-203ENST00000392334 MFN1Q8IWA4 741 aa20.16■□□□□ 0.82
CSNK1D-203ENST00000392334 CELF6Q96J87 481 aaKnown RBP20.16■□□□□ 0.82
CSNK1D-203ENST00000392334 CLPTM1LQ96KA5 538 aa20.16■□□□□ 0.82
CSNK1D-203ENST00000392334 ECSITQ9BQ95 431 aa20.16■□□□□ 0.82
CSNK1D-203ENST00000392334 PBX4Q9BYU1 374 aa20.16■□□□□ 0.82
CSNK1D-203ENST00000392334 DNAJC28Q9NX36 388 aa20.16■□□□□ 0.82
CSNK1D-203ENST00000392334 CLIC5Q9NZA1 410 aa20.16■□□□□ 0.82
CSNK1D-203ENST00000392334 SEPT10Q9P0V9 454 aa20.16■□□□□ 0.82
CSNK1D-203ENST00000392334 HS3ST4Q9Y661 456 aa20.16■□□□□ 0.82
CSNK1D-203ENST00000392334 SLC12A8A0AV02 714 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 KCNU1A8MYU2 1149 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 HACD1B0YJ81 288 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 MAP3K13O43283 966 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 CCNT2O60583 730 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 PLIN3O60664 434 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 CNPP09543 421 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 VAV1P15498 845 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 PAPOLAP51003 745 aaKnown RBP20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 PLD1Q13393 1074 aa20.15■□□□□ 0.82
CSNK1D-203ENST00000392334 RAB33AQ14088 237 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms