RNA–Protein interactions for RNA: ENST00000381990.6

GPNMB-202, Transcript of glycoprotein nmb, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GPNMB, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-202ENST00000381990 ZMIZ2Q8NF64 920 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 ISL2Q96A47 359 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 SUSD3Q96L08 255 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 FERMT1Q9BQL6 677 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 TRIM56Q9BRZ2 755 aaKnown RBP9.07□□□□□ -0.96
GPNMB-202ENST00000381990 SLC2A11Q9BYW1 496 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 ULBP1Q9BZM6 244 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 SHCBP1LQ9BZQ2 653 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 TCF7L2Q9NQB0 619 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 MTMR10Q9NXD2 777 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 TXNDC16Q9P2K2 825 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 APPL1Q9UKG1 709 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 ADAM28Q9UKQ2 775 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 G3BP2Q9UN86 482 aaKnown RBP9.07□□□□□ -0.96
GPNMB-202ENST00000381990 HTTP42858 3142 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 PRSS51A0A1B0GVH4 220 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 PSMC3P17980 439 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 PGAM1P18669 254 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 SLC5A2P31639 672 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 FAM189BP81408 668 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 PPIDQ08752 370 aaKnown RBP9.07□□□□□ -0.96
GPNMB-202ENST00000381990 DPYSQ14117 519 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 RFTN1Q14699 578 aaPredicted RBP9.07□□□□□ -0.96
GPNMB-202ENST00000381990 HERC3Q15034 1050 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 ZNF423Q2M1K9 1284 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 DHRS4L2Q6PKH6 230 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 PGAM4Q8N0Y7 254 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 MPP5Q8N3R9 675 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 CCDC185Q8N715 623 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 MYLPFQ96A32 169 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 LENG8Q96PV6 779 aaPredicted RBP9.07□□□□□ -0.96
GPNMB-202ENST00000381990 KCTD15Q96SI1 283 aaPredicted RBP9.07□□□□□ -0.96
GPNMB-202ENST00000381990 PRDM16Q9HAZ2 1276 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 CSNK1G1Q9HCP0 422 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 EIF2B3Q9NR50 452 aaKnown RBP9.07□□□□□ -0.96
GPNMB-202ENST00000381990 MRGBPQ9NV56 204 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 TMEM30AQ9NV96 361 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 RHBDL2Q9NX52 303 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 RCOR3Q9P2K3 495 aaPredicted RBP9.07□□□□□ -0.96
GPNMB-202ENST00000381990 EPS15L1Q9UBC2 864 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 MID2Q9UJV3 735 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 CEPT1Q9Y6K0 416 aa9.07□□□□□ -0.96
GPNMB-202ENST00000381990 TTC36A6NLP5 189 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 HHLA1C9JL84 531 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 NRP1O14786 923 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 TADA2AO75478 443 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 BCAS2O75934 225 aaPredicted RBP9.06□□□□□ -0.96
GPNMB-202ENST00000381990 METTL18O95568 372 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 HSPA4LO95757 839 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 PRKCGP05129 697 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 TYMPP19971 482 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 TYK2P29597 1187 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 VEGFBP49765 207 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 CDK9P50750 372 aaKnown RBP9.06□□□□□ -0.96
GPNMB-202ENST00000381990 TUBA4AP68366 448 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 MRPS22P82650 360 aaKnown RBP9.06□□□□□ -0.96
GPNMB-202ENST00000381990 MAPRE1Q15691 268 aaKnown RBP9.06□□□□□ -0.96
GPNMB-202ENST00000381990 VWA5B1Q5TIE3 1220 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 OTUD1Q5VV17 481 aaPredicted RBP9.06□□□□□ -0.96
GPNMB-202ENST00000381990 LRRC8BQ6P9F7 803 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 FAM131BQ86XD5 332 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 DSELQ8IZU8 1212 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 THEM5Q8N1Q8 247 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 CPSF7Q8N684 471 aaKnown RBP9.06□□□□□ -0.96
GPNMB-202ENST00000381990 FNDC8Q8TC99 324 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 HASPINQ8TF76 798 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 PDCD6IPQ8WUM4 868 aaKnown RBP9.06□□□□□ -0.96
GPNMB-202ENST00000381990 LINC01599Q8WXQ3 324 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 CSPG4P5Q96PW8 444 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 MRPL40Q9NQ50 206 aaKnown RBP9.06□□□□□ -0.96
GPNMB-202ENST00000381990 FZD10Q9ULW2 581 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 RPS6KL1Q9Y6S9 549 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 E9PBE3 544 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 M0QYT0 321 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 KLHL41O60662 606 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 ME2P23368 584 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 YY1P25490 414 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 PIK3R1P27986 724 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 ARRB2P32121 409 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 GP5P40197 560 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 ARL4AP40617 200 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 MAGEA12P43365 314 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 COG7P83436 770 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 GRTP1Q5TC63 336 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 SYPL2Q5VXT5 272 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 OVOS1Q6IE37 1185 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 HFE2Q6ZVN8 426 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 GPRIN1Q7Z2K8 1008 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 TSPAN14Q8NG11 270 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 CEP70Q8NHQ1 597 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 URGCPQ8TCY9 931 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 QKIQ96PU8 341 aaKnown RBP eCLIP9.06□□□□□ -0.96
GPNMB-202ENST00000381990 SLC9A7Q96T83 725 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 PKMYT1Q99640 499 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 CPNE1Q99829 537 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 FTHL17Q9BXU8 183 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 SEZ6LQ9BYH1 1024 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 HACD3Q9P035 362 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 ZNHIT2Q9UHR6 403 aa9.06□□□□□ -0.96
GPNMB-202ENST00000381990 GOLGA8QA0A0J9YX86 632 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms