RNA–Protein interactions for RNA: ENST00000381208.9

RPAIN-202, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,394 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-202ENST00000381208 PLXNB3Q9ULL4 1909 aa13.22□□□□□ -0.29
RPAIN-202ENST00000381208 POP4O95707 220 aaKnown RBP13.21□□□□□ -0.29
RPAIN-202ENST00000381208 MBD3O95983 291 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 PRLRP16471 622 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 GLDCP23378 1020 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 HTR7P34969 479 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 RABIFP47224 123 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 KLK7P49862 253 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 HDAC4P56524 1084 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 YBEYP58557 167 aaPredicted RBP13.21□□□□□ -0.29
RPAIN-202ENST00000381208 HNRNPKP61978 463 aaKnown RBP eCLIP13.21□□□□□ -0.29
RPAIN-202ENST00000381208 PTP4A2Q12974 167 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 SGCGQ13326 291 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 C15orf59Q2T9L4 293 aaPredicted RBP13.21□□□□□ -0.29
RPAIN-202ENST00000381208 EFHC2Q5JST6 749 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 KYAT3Q6YP21 454 aaKnown RBP13.21□□□□□ -0.29
RPAIN-202ENST00000381208 SLFN11Q7Z7L1 901 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 DENND6BQ8NEG7 585 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 OR2AP1Q8NGE2 309 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 MDM1Q8TC05 714 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 GPT2Q8TD30 523 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 FAM172AQ8WUF8 416 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 RFFLQ8WZ73 363 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 LENG8Q96PV6 779 aaPredicted RBP13.21□□□□□ -0.29
RPAIN-202ENST00000381208 DUSP23Q9BVJ7 150 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 SLC17A9Q9BYT1 436 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 NAT10Q9H0A0 1025 aaKnown RBP13.21□□□□□ -0.29
RPAIN-202ENST00000381208 CATSPERBQ9H7T0 1116 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 USP29Q9HBJ7 922 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 MYO6Q9UM54 1294 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 FADS3Q9Y5Q0 445 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 PTPRBP23467 1997 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 DOCK4Q8N1I0 1966 aa13.21□□□□□ -0.29
RPAIN-202ENST00000381208 EIF3CLB5ME19 914 aaKnown RBP13.2□□□□□ -0.3
RPAIN-202ENST00000381208 EPHB6O15197 1021 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 FERP16591 822 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 DGKAP23743 735 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 RFC1P35251 1148 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-202ENST00000381208 ZNF143P52747 638 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-202ENST00000381208 CYP4F3Q08477 520 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 DNAJC3Q13217 504 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 PROX2Q3B8N5 592 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 INO80DQ53TQ3 878 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-202ENST00000381208 ZNF805Q5CZA5 627 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 DNAJC24Q6P3W2 148 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 WDR59Q6PJI9 974 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 RYBPQ8N488 228 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-202ENST00000381208 OR4C6Q8NH72 309 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 JOSD2Q8TAC2 188 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 VCPIP1Q96JH7 1222 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 EIF3CQ99613 913 aaKnown RBP13.2□□□□□ -0.3
RPAIN-202ENST00000381208 EPAS1Q99814 870 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 CALN1Q9BXU9 219 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 NRSN2Q9GZP1 204 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 ZDHHC6Q9H6R6 413 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 SEPT11Q9NVA2 429 aaKnown RBP13.2□□□□□ -0.3
RPAIN-202ENST00000381208 DNAI1Q9UI46 699 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 ZFR2Q9UPR6 939 aaKnown RBP13.2□□□□□ -0.3
RPAIN-202ENST00000381208 FCF1Q9Y324 198 aaKnown RBP13.2□□□□□ -0.3
RPAIN-202ENST00000381208 ATRXP46100 2492 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 DSPP15924 2871 aaKnown RBP13.2□□□□□ -0.3
RPAIN-202ENST00000381208 FAM149AA5PLN7 773 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 H3BM21 787 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 NEMP1O14524 444 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 TOR1BO14657 336 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 FGF10O15520 208 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-202ENST00000381208 KDELR3O43731 214 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 PIAS2O75928 621 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 EPHB2P29323 1055 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 ACVRL1P37023 503 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 DUSP3P51452 185 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-202ENST00000381208 SUOXP51687 545 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 DAB2P98082 770 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 PARP15Q460N3 678 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 CCDC183Q5T5S1 534 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 HES3Q5TGS1 186 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 GCNT7Q6ZNI0 430 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 Q6ZSR6 202 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 MON1BQ7L1V2 547 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 PARS2Q7L3T8 475 aaKnown RBP13.2□□□□□ -0.3
RPAIN-202ENST00000381208 PTAR1Q7Z6K3 402 aaPredicted RBP13.2□□□□□ -0.3
RPAIN-202ENST00000381208 RTL3Q8N8U3 475 aaKnown RBP13.2□□□□□ -0.3
RPAIN-202ENST00000381208 OR13H1Q8NG92 308 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 KLK6Q92876 244 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 GDAP1L1Q96MZ0 367 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 PCDHB18PQ96TA0 734 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 AGPAT1Q99943 283 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 CNPY3Q9BT09 278 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 C1QTNF7Q9BXJ2 289 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 TM6SF2Q9BZW4 377 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 NLGN3Q9NZ94 848 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 NCKIPSDQ9NZQ3 722 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 RAXQ9Y2V3 346 aa13.2□□□□□ -0.3
RPAIN-202ENST00000381208 TRPM6Q9BX84 2022 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 WDFY3Q8IZQ1 3526 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 A0A087WV48 116 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 C16orf96A6NNT2 1141 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 WASH4PA8MWX3 477 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 FAM72CH0Y354 149 aa13.19□□□□□ -0.3
RPAIN-202ENST00000381208 FPGTO14772 594 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms