RNA–Protein interactions for RNA: ENST00000380707.8

SMN1-202, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMN1, Length 1,536 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-202ENST00000380707 KRIT1O00522 736 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 INSIG1O15503 277 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 KCNN4O15554 427 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 PAPSS2O95340 614 aaPredicted RBP12.84□□□□□ -0.35
SMN1-202ENST00000380707 GABRG2P18507 467 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 NDUFV2P19404 249 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 CHRNA3P32297 505 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 RECQLP46063 649 aaPredicted RBP12.84□□□□□ -0.35
SMN1-202ENST00000380707 PXNP49023 591 aaPredicted RBP12.84□□□□□ -0.35
SMN1-202ENST00000380707 SCNN1BP51168 640 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 TEX44Q53QW1 395 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 DRICH1Q6PGQ1 229 aaPredicted RBP12.84□□□□□ -0.35
SMN1-202ENST00000380707 TSSK4Q6SA08 328 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 CACUL1Q86Y37 369 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 TMPRSS6Q8IU80 811 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 MMAAQ8IVH4 418 aaKnown RBP12.84□□□□□ -0.35
SMN1-202ENST00000380707 ZNF567Q8N184 647 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 BBS5Q8N3I7 341 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 RYBPQ8N488 228 aaPredicted RBP12.84□□□□□ -0.35
SMN1-202ENST00000380707 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.84□□□□□ -0.35
SMN1-202ENST00000380707 FAM71DQ8N9W8 422 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 TSTD1Q8NFU3 115 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 OR2T3Q8NH03 318 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 HMGB4Q8WW32 186 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 MRGPRX1Q96LB2 322 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 GDAP1L1Q96MZ0 367 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 MGME1Q9BQP7 344 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 RSPH9Q9H1X1 276 aaPredicted RBP12.84□□□□□ -0.35
SMN1-202ENST00000380707 EVLQ9UI08 416 aaPredicted RBP12.84□□□□□ -0.35
SMN1-202ENST00000380707 PPM1HQ9ULR3 514 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 ATP8A1Q9Y2Q0 1164 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 TTLL3Q9Y4R7 772 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 WASF2Q9Y6W5 498 aa12.84□□□□□ -0.35
SMN1-202ENST00000380707 ZBTB24O43167 697 aaPredicted RBP12.83□□□□□ -0.35
SMN1-202ENST00000380707 MTSS1O43312 755 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 LAMTOR5O43504 91 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 LEFTY1O75610 366 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 POP4O95707 220 aaKnown RBP12.83□□□□□ -0.35
SMN1-202ENST00000380707 IGSF6O95976 241 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 CR2P20023 1033 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 HSPA9P38646 679 aaKnown RBP12.83□□□□□ -0.35
SMN1-202ENST00000380707 KCNJ1P48048 391 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 CSNK1DP48730 415 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 METAP1P53582 386 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 GDF10P55107 478 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 RPS14P62263 151 aaKnown RBP12.83□□□□□ -0.35
SMN1-202ENST00000380707 ITKQ08881 620 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 IHHQ14623 411 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 ARSIQ5FYB1 569 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 ANO7Q6IWH7 933 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 SRLQ86TD4 932 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 MDGA1Q8NFP4 955 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 GRIN3AQ8TCU5 1115 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 OR8D1Q8WZ84 308 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 TEKT5Q96M29 485 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 CCDC114Q96M63 670 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 HEPHQ9BQS7 1158 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 LRFN3Q9BTN0 628 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 POLR1EQ9GZS1 481 aaKnown RBP12.83□□□□□ -0.35
SMN1-202ENST00000380707 ZDHHC6Q9H6R6 413 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 NOD2Q9HC29 1040 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 PRMT8Q9NR22 394 aaPredicted RBP12.83□□□□□ -0.35
SMN1-202ENST00000380707 HOMER3Q9NSC5 361 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 IL36AQ9UHA7 158 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 AMACRQ9UHK6 382 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 ZNF148Q9UQR1 794 aa12.83□□□□□ -0.35
SMN1-202ENST00000380707 DRG1Q9Y295 367 aaKnown RBP12.83□□□□□ -0.35
SMN1-202ENST00000380707 FARP1Q9Y4F1 1045 aaPredicted RBP12.83□□□□□ -0.35
SMN1-202ENST00000380707 ESPNB1AK53 854 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 ALOX15BO15296 676 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 RNASEH1O60930 286 aaKnown RBP12.83□□□□□ -0.36
SMN1-202ENST00000380707 NEBLO76041 1014 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 URI1O94763 535 aaPredicted RBP12.83□□□□□ -0.36
SMN1-202ENST00000380707 APBB3O95704 486 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 IL1BP01584 269 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 ITGAVP06756 1048 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 C7P10643 843 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 TDGF1P13385 188 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 CD68P34810 354 aaPredicted RBP12.83□□□□□ -0.36
SMN1-202ENST00000380707 DSC2Q02487 901 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 DMWDQ09019 674 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 NIPAL4Q0D2K0 466 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 CYP1B1Q16678 543 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 KCTD19Q17RG1 926 aaPredicted RBP12.83□□□□□ -0.36
SMN1-202ENST00000380707 POM121L1PQ3SYA9 428 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 ALG1LQ6GMV1 187 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 TTC27Q6P3X3 843 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 CAMKK1Q8N5S9 505 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 C12orf50Q8NA57 414 aaPredicted RBP12.83□□□□□ -0.36
SMN1-202ENST00000380707 TMIEQ8NEW7 156 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 ARRDC2Q8TBH0 407 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 MAGOHBQ96A72 148 aaKnown RBP12.83□□□□□ -0.36
SMN1-202ENST00000380707 NUDCD1Q96RS6 583 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 VAT1Q99536 393 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 SEMA3CQ99985 751 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 FERMT1Q9BQL6 677 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 FBRSQ9HAH7 460 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 KLHL8Q9P2G9 620 aaPredicted RBP12.83□□□□□ -0.36
SMN1-202ENST00000380707 RNF14Q9UBS8 474 aa12.83□□□□□ -0.36
SMN1-202ENST00000380707 BPTFQ12830 3046 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms