RNA–Protein interactions for RNA: ENST00000380469.7

VPS16-203, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 2 BASIC

Gene VPS16, Length 2,318 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-203ENST00000380469 GLOD4Q9HC38 313 aa16.53■□□□□ 0.24
VPS16-203ENST00000380469 ZBTB26Q9HCK0 441 aa16.53■□□□□ 0.24
VPS16-203ENST00000380469 TRPC5OSA6NMA1 111 aa16.53■□□□□ 0.24
VPS16-203ENST00000380469 NPHS1O60500 1241 aa16.53■□□□□ 0.24
VPS16-203ENST00000380469 SNUPNO95149 360 aaKnown RBP16.53■□□□□ 0.24
VPS16-203ENST00000380469 MT-CYBP00156 380 aaPredicted RBP16.53■□□□□ 0.24
VPS16-203ENST00000380469 ENO3P13929 434 aaPredicted RBP16.53■□□□□ 0.24
VPS16-203ENST00000380469 PAMP19021 973 aa16.53■□□□□ 0.24
VPS16-203ENST00000380469 KPNA2P52292 529 aaKnown RBP16.53■□□□□ 0.24
VPS16-203ENST00000380469 SLC12A2P55011 1212 aa16.53■□□□□ 0.24
VPS16-203ENST00000380469 GEMP55040 296 aa16.53■□□□□ 0.24
VPS16-203ENST00000380469 CNPY1Q3B7I2 92 aa16.53■□□□□ 0.24
VPS16-203ENST00000380469 TMEM198Q66K66 360 aa16.53■□□□□ 0.24
VPS16-203ENST00000380469 ESRP1Q6NXG1 681 aaKnown RBP16.53■□□□□ 0.24
VPS16-203ENST00000380469 CATSPER1Q8NEC5 780 aa16.53■□□□□ 0.24
VPS16-203ENST00000380469 PTCD2Q8WV60 388 aaKnown RBP16.53■□□□□ 0.24
VPS16-203ENST00000380469 LENG1Q96BZ8 264 aaPredicted RBP16.53■□□□□ 0.24
VPS16-203ENST00000380469 ELMO2Q96JJ3 720 aa16.53■□□□□ 0.24
VPS16-203ENST00000380469 PPP1R2P1Q96PQ5 205 aa16.53■□□□□ 0.24
VPS16-203ENST00000380469 GCNAQ96QF7 691 aa16.53■□□□□ 0.24
VPS16-203ENST00000380469 GAD1Q99259 594 aa16.53■□□□□ 0.24
VPS16-203ENST00000380469 MRPL46Q9H2W6 279 aaKnown RBP16.53■□□□□ 0.24
VPS16-203ENST00000380469 WDR41Q9HAD4 459 aa16.53■□□□□ 0.24
VPS16-203ENST00000380469 TRIP12Q14669 1992 aaPredicted RBP16.53■□□□□ 0.24
VPS16-203ENST00000380469 A0A087X1B8 175 aa16.52■□□□□ 0.24
VPS16-203ENST00000380469 CAPN8A6NHC0 703 aa16.52■□□□□ 0.24
VPS16-203ENST00000380469 MEIS3P2A8K0S8 358 aa16.52■□□□□ 0.24
VPS16-203ENST00000380469 TADA2AO75478 443 aa16.52■□□□□ 0.24
VPS16-203ENST00000380469 ME2P23368 584 aa16.52■□□□□ 0.24
VPS16-203ENST00000380469 ZNF460Q14592 562 aa16.52■□□□□ 0.24
VPS16-203ENST00000380469 OLFML2BQ68BL8 750 aa16.52■□□□□ 0.24
VPS16-203ENST00000380469 ARHGAP36Q6ZRI8 547 aa16.52■□□□□ 0.24
VPS16-203ENST00000380469 TMEM126BQ8IUX1 230 aa16.52■□□□□ 0.24
VPS16-203ENST00000380469 CEP97Q8IW35 865 aa16.52■□□□□ 0.24
VPS16-203ENST00000380469 MYLPFQ96A32 169 aa16.52■□□□□ 0.24
VPS16-203ENST00000380469 MRPL57Q9BQC6 102 aaKnown RBP16.52■□□□□ 0.24
VPS16-203ENST00000380469 TRIM62Q9BVG3 475 aa16.52■□□□□ 0.24
VPS16-203ENST00000380469 RHOBTB2Q9BYZ6 727 aa16.52■□□□□ 0.24
VPS16-203ENST00000380469 ZNF408Q9H9D4 720 aa16.52■□□□□ 0.24
VPS16-203ENST00000380469 CSNK1G1Q9HCP0 422 aa16.52■□□□□ 0.24
VPS16-203ENST00000380469 NCKIPSDQ9NZQ3 722 aa16.52■□□□□ 0.24
VPS16-203ENST00000380469 PGK1P00558 417 aa16.52■□□□□ 0.23
VPS16-203ENST00000380469 XRCC1P18887 633 aaPredicted RBP16.52■□□□□ 0.23
VPS16-203ENST00000380469 ARCN1P48444 511 aaKnown RBP16.52■□□□□ 0.23
VPS16-203ENST00000380469 PKNOX1P55347 436 aa16.52■□□□□ 0.23
VPS16-203ENST00000380469 MRPS22P82650 360 aaKnown RBP16.52■□□□□ 0.23
VPS16-203ENST00000380469 NSUN2Q08J23 767 aaKnown RBP eCLIP16.52■□□□□ 0.23
VPS16-203ENST00000380469 CNGA3Q16281 694 aa16.52■□□□□ 0.23
VPS16-203ENST00000380469 CCDC117Q8IWD4 279 aaPredicted RBP16.52■□□□□ 0.23
VPS16-203ENST00000380469 DQX1Q8TE96 717 aaKnown RBP16.52■□□□□ 0.23
VPS16-203ENST00000380469 DCUN1D1Q96GG9 259 aa16.52■□□□□ 0.23
VPS16-203ENST00000380469 GPR78Q96P69 363 aa16.52■□□□□ 0.23
VPS16-203ENST00000380469 OMDQ99983 421 aa16.52■□□□□ 0.23
VPS16-203ENST00000380469 KATNAL1Q9BW62 490 aa16.52■□□□□ 0.23
VPS16-203ENST00000380469 FTHL17Q9BXU8 183 aa16.52■□□□□ 0.23
VPS16-203ENST00000380469 AP5M1Q9H0R1 490 aa16.52■□□□□ 0.23
VPS16-203ENST00000380469 ENTPD7Q9NQZ7 604 aa16.52■□□□□ 0.23
VPS16-203ENST00000380469 TCAF1Q9Y4C2 921 aa16.52■□□□□ 0.23
VPS16-203ENST00000380469 CLGNO14967 610 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 MATN3O15232 486 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 CD151P48509 253 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 RFTN1Q14699 578 aaPredicted RBP16.51■□□□□ 0.23
VPS16-203ENST00000380469 FAM110CQ1W6H9 321 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 PIWIL4Q7Z3Z4 852 aaKnown RBP16.51■□□□□ 0.23
VPS16-203ENST00000380469 SPATA6LQ8N4H0 392 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 LZTR1Q8N653 840 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 USP13Q92995 863 aaPredicted RBP16.51■□□□□ 0.23
VPS16-203ENST00000380469 MARK4Q96L34 752 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 PARK7Q99497 189 aaKnown RBP16.51■□□□□ 0.23
VPS16-203ENST00000380469 IL12RB2Q99665 862 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 FSD1LQ9BXM9 530 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 CATSPERBQ9H7T0 1116 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 MRM3Q9HC36 420 aaKnown RBP16.51■□□□□ 0.23
VPS16-203ENST00000380469 TBC1D30Q9Y2I9 924 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 M0QZ92 97 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 DENRO43583 198 aaKnown RBP16.51■□□□□ 0.23
VPS16-203ENST00000380469 CHRM1P11229 460 aaPredicted RBP16.51■□□□□ 0.23
VPS16-203ENST00000380469 BDNFP23560 247 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 SLC1A2P43004 574 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 CEACAM7Q14002 265 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 ADGRE1Q14246 886 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 C11orf91Q3C1V1 193 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 SH2D4BQ5SQS7 431 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 C9orf131Q5VYM1 1079 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 AP1ARQ63HQ0 302 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 DENND5AQ6IQ26 1287 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 UGT2A3Q6UWM9 527 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 KDM1BQ8NB78 822 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 BHLHE22Q8NFJ8 381 aaPredicted RBP16.51■□□□□ 0.23
VPS16-203ENST00000380469 CEP70Q8NHQ1 597 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 DLG3Q92796 817 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 FAM105AQ9NUU6 356 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 GTSE1Q9NYZ3 720 aa16.51■□□□□ 0.23
VPS16-203ENST00000380469 COPG1Q9Y678 874 aaKnown RBP16.51■□□□□ 0.23
VPS16-203ENST00000380469 FGF10O15520 208 aaPredicted RBP16.5■□□□□ 0.23
VPS16-203ENST00000380469 AP1G1O43747 822 aa16.5■□□□□ 0.23
VPS16-203ENST00000380469 JUNP05412 331 aaKnown RBP16.5■□□□□ 0.23
VPS16-203ENST00000380469 ATP5F1P24539 256 aaPredicted RBP16.5■□□□□ 0.23
VPS16-203ENST00000380469 RPL9P32969 192 aaKnown RBP16.5■□□□□ 0.23
VPS16-203ENST00000380469 MSX2P35548 267 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms