RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 SLC38A8A6NNN8 435 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 TBKBP1A7MCY6 615 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 TMEM114B3SHH9 223 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 PEX11BO96011 259 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 GSRP00390 522 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 FGF3P11487 239 aaPredicted RBP10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 RAG1P15918 1043 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 TPH1P17752 444 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 CALB2P22676 271 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 TARSP26639 723 aaKnown RBP10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 TUFMP49411 452 aaKnown RBP10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 CSRP3P50461 194 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 ARPP19P56211 112 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 IL10RBQ08334 325 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 LAMB3Q13751 1172 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 PCLAFQ15004 111 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 PSMD5Q16401 504 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 CTC1Q2NKJ3 1217 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 C5orf22Q49AR2 442 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 RTP2Q5QGT7 225 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 MARC1Q5VT66 337 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 KDELC1Q6UW63 502 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 RNF19BQ6ZMZ0 732 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 KIAA0408Q6ZU52 694 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 ARID3BQ8IVW6 561 aaPredicted RBP10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 CALML6Q8TD86 181 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 IMP4Q96G21 291 aaKnown RBP10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 NSL1Q96IY1 281 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 MRGPRX2Q96LB1 330 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 AGAP2Q99490 1192 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 PBX4Q9BYU1 374 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 HAO1Q9UJM8 370 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 BACE2Q9Y5Z0 518 aa10.61□□□□□ -0.71
POLR2J3-201ENST00000379340 A0A096LPK6 155 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 CARNS1A5YM72 827 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 HGSO14964 777 aaPredicted RBP10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 RAMP2O60895 175 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 PAPSS2O95340 614 aaPredicted RBP10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 VNN2O95498 520 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 MT-CYBP00156 380 aaPredicted RBP10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 KRT16P08779 473 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 T-ENOLP0DO92 83 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 RALBP11234 206 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 CPA3P15088 417 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 SERPINB3P29508 390 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 SLC1A6P48664 564 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 GATMP50440 423 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 KPNA2P52292 529 aaKnown RBP10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 THOC5Q13769 683 aaKnown RBP10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 BTG3Q14201 252 aaPredicted RBP10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 SLC14A2Q15849 920 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 USP41Q3LFD5 358 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 RASIP1Q5U651 963 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 SNX30Q5VWJ9 437 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 RAP1GAP2Q684P5 730 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 SLC8B1Q6J4K2 584 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 FBXL22Q6P050 247 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 C16orf46Q6P387 395 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 KLHDC10Q6PID8 442 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 ZC3HC1Q86WB0 502 aaKnown RBP10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 LMNTD2Q8IXW0 634 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 TTC9BQ8N6N2 239 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 PIWIL2Q8TC59 973 aaKnown RBP10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 SLC7A6OSQ96CW6 309 aaPredicted RBP10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 HMCESQ96FZ2 354 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 ZNF599Q96NL3 588 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 RPRD1AQ96P16 312 aaPredicted RBP10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 TLE6Q9H808 572 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 NOD2Q9HC29 1040 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 ATP13A1Q9HD20 1204 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 TREX1Q9NSU2 369 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 IL1RAPL1Q9NZN1 696 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 TMEM216Q9P0N5 145 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 MTRRQ9UBK8 725 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 TLK1Q9UKI8 766 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 MICAL3Q7RTP6 2002 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 MYLKQ15746 1914 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 F5H5T6 163 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 FCHO1O14526 889 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 TLR5O60602 858 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 PMPCBO75439 489 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 EFEMP2O95967 443 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 PRKCGP05129 697 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 C2P06681 752 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 MYL4P12829 197 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 TACR2P21452 398 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 ARCN1P48444 511 aaKnown RBP10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 HARS2P49590 506 aaKnown RBP10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 SERPINH1P50454 418 aaKnown RBP10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 MNAT1P51948 309 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 HK2P52789 917 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 WNT3AP56704 352 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 TFF2Q03403 129 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 ASPHQ12797 758 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 SLC12A1Q13621 1099 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 POU6F1Q14863 301 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 POLD3Q15054 466 aaPredicted RBP10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 ALFQ53S48 1182 aa10.6□□□□□ -0.71
POLR2J3-201ENST00000379340 CMC1Q7Z7K0 106 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms