RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 OSBPL1AQ9BXW6 950 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 TPSD1Q9BZJ3 242 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 TM6SF2Q9BZW4 377 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 ITM2CQ9NQX7 267 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 LHX3Q9UBR4 397 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 IL36AQ9UHA7 158 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 PPM1HQ9ULR3 514 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 NCKAP1Q9Y2A7 1128 aa12.11□□□□□ -0.47
PCNA-201ENST00000379143 GVINP1Q7Z2Y8 2422 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 CACNA1IQ9P0X4 2223 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 USP27XA6NNY8 438 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 IGLV3-19P01714 112 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 CCNB1P14635 433 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 PECAM1P16284 738 aaPredicted RBP12.1□□□□□ -0.47
PCNA-201ENST00000379143 OXTRP30559 389 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 SLC8A1P32418 973 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 P2RY2P41231 377 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 MMP13P45452 471 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 ADCY2Q08462 1091 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 DMWDQ09019 674 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 SLC10A7Q0GE19 358 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 AP1B1Q10567 949 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 MYLK3Q32MK0 819 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 RALGPS1Q5JS13 557 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 NPNTQ6UXI9 565 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 USP30Q70CQ3 517 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 MMAAQ8IVH4 418 aaKnown RBP12.1□□□□□ -0.47
PCNA-201ENST00000379143 SLC35F6Q8N357 371 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 RYBPQ8N488 228 aaPredicted RBP12.1□□□□□ -0.47
PCNA-201ENST00000379143 TSEN2Q8NCE0 465 aaKnown RBP12.1□□□□□ -0.47
PCNA-201ENST00000379143 PIP4K2CQ8TBX8 421 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 MAIP1Q8WWC4 291 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 GAB3Q8WWW8 586 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 HAUS1Q96CS2 278 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 LGMNQ99538 433 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 SLC6A17Q9H1V8 727 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 PABPC3Q9H361 631 aaKnown RBP12.1□□□□□ -0.47
PCNA-201ENST00000379143 DYRK4Q9NR20 520 aa12.1□□□□□ -0.47
PCNA-201ENST00000379143 USP36Q9P275 1121 aaKnown RBP12.1□□□□□ -0.47
PCNA-201ENST00000379143 SAE1Q9UBE0 346 aaPredicted RBP12.1□□□□□ -0.47
PCNA-201ENST00000379143 KRIT1O00522 736 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 LILRB5O75023 590 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 LEFTY1O75610 366 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 RPP40O75818 363 aaKnown RBP12.09□□□□□ -0.47
PCNA-201ENST00000379143 CES1P23141 567 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 PSMD8P48556 350 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 TPMTP51580 245 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 AP1S1P61966 158 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 IFI35P80217 286 aaPredicted RBP12.09□□□□□ -0.47
PCNA-201ENST00000379143 KLF1Q13351 362 aaPredicted RBP12.09□□□□□ -0.47
PCNA-201ENST00000379143 NOMO1Q15155 1222 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 ARSIQ5FYB1 569 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 AADACL2Q6P093 401 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 SLC36A4Q6YBV0 504 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 ERMP1Q7Z2K6 904 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 CHST14Q8NCH0 376 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 ACTL9Q8TC94 416 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 PBKQ96KB5 322 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 TUBGCP5Q96RT8 1024 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 OMDQ99983 421 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 MGME1Q9BQP7 344 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 FRMD8P1Q9BZ68 369 aaPredicted RBP12.09□□□□□ -0.47
PCNA-201ENST00000379143 CPEB1Q9BZB8 566 aaKnown RBP12.09□□□□□ -0.47
PCNA-201ENST00000379143 POLR1EQ9GZS1 481 aaKnown RBP12.09□□□□□ -0.47
PCNA-201ENST00000379143 SEMA4AQ9H3S1 761 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 ZDHHC6Q9H6R6 413 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 FBXL12Q9NXK8 326 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 FZD4Q9ULV1 537 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 WASF2Q9Y6W5 498 aa12.09□□□□□ -0.47
PCNA-201ENST00000379143 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.08□□□□□ -0.48
PCNA-201ENST00000379143 KPNA3O00505 521 aaPredicted RBP12.08□□□□□ -0.48
PCNA-201ENST00000379143 CES2O00748 559 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 ENC1O14682 589 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 MID1O15344 667 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 SLC7A4O43246 635 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 CTSLP07711 333 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 GNG11P61952 73 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 OTUD4Q01804 1114 aaKnown RBP12.08□□□□□ -0.48
PCNA-201ENST00000379143 PRKD1Q15139 912 aaPredicted RBP12.08□□□□□ -0.48
PCNA-201ENST00000379143 MAP7D1Q3KQU3 841 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 SLC45A4Q5BKX6 768 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 SPDYCQ5MJ68 293 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 ATXN7L2Q5T6C5 722 aaPredicted RBP12.08□□□□□ -0.48
PCNA-201ENST00000379143 GDPD4Q6W3E5 623 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 SRLQ86TD4 932 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 ZC3H18Q86VM9 953 aaKnown RBP12.08□□□□□ -0.48
PCNA-201ENST00000379143 CACUL1Q86Y37 369 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 SLC13A5Q86YT5 568 aaPredicted RBP12.08□□□□□ -0.48
PCNA-201ENST00000379143 CDKL3Q8IVW4 592 aaPredicted RBP12.08□□□□□ -0.48
PCNA-201ENST00000379143 GRIN3AQ8TCU5 1115 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 HCAR2Q8TDS4 363 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 GANCQ8TET4 914 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 EXOC2Q96KP1 924 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 ZNF641Q96N77 438 aaPredicted RBP12.08□□□□□ -0.48
PCNA-201ENST00000379143 QKIQ96PU8 341 aaKnown RBP eCLIP12.08□□□□□ -0.48
PCNA-201ENST00000379143 NUDCD1Q96RS6 583 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 VAT1Q99536 393 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 IL12RB2Q99665 862 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 HERPUD2Q9BSE4 406 aa12.08□□□□□ -0.48
PCNA-201ENST00000379143 ATP13A3Q9H7F0 1226 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms