RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 SLC7A14Q8TBB6 771 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 ZSCAN18Q8TBC5 510 aaPredicted RBP16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 URGCPQ8TCY9 931 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 WNT8BQ93098 351 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 COQ10BQ9H8M1 238 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 CHRAC1Q9NRG0 131 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 STAP1Q9ULZ2 295 aa16.83■□□□□ 0.28
PCDHA1-201ENST00000378133 TMEM114B3SHH9 223 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 TRIM13O60858 407 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 SNAI1O95863 264 aaPredicted RBP16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 MMP3P08254 477 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 SMPD1P17405 629 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 PTPN1P18031 435 aaKnown RBP16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 TXNL4AP83876 142 aaKnown RBP16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 C16orf72Q14CZ0 275 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 KRT80Q6KB66 452 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 Q6ZNX1 250 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 SETD3Q86TU7 594 aaPredicted RBP16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 FAM156AQ8NDB6 213 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 ISL2Q96A47 359 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 OSBPL6Q9BZF3 934 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 KATNBL1Q9H079 304 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 EFCAB1Q9HAE3 211 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 NMRAL1Q9HBL8 299 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 ADAM28Q9UKQ2 775 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 PAIP2BQ9ULR5 123 aaKnown RBP16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 MYRFQ9Y2G1 1151 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 SCN4AP35499 1836 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 CCDC78A2IDD5 438 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 I6L893 689 aaPredicted RBP16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 MATN2O00339 956 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 ACOT8O14734 319 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 NRP1O14786 923 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 NPR3P17342 541 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 ADRA1BP35368 520 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 ENTPD1P49961 510 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 PDAP1Q13442 181 aaKnown RBP16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 PAQR9Q6ZVX9 377 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 BNIPLQ7Z465 357 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 PATL1Q86TB9 770 aaKnown RBP16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 SIX6OS1Q8N1H7 587 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 SHCBP1Q8NEM2 672 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 ATP6V1E2Q96A05 226 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 TMA16Q96EY4 203 aaKnown RBP16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 ZNF560Q96MR9 790 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 HNRNPABQ99729 332 aaKnown RBP16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 TMEM79Q9BSE2 394 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 GATA5Q9BWX5 397 aaPredicted RBP16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 C20orf96Q9NUD7 363 aaPredicted RBP16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 UBP1Q9NZI7 540 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 PIN4Q9Y237 131 aaKnown RBP16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 SQORQ9Y6N5 450 aa16.82■□□□□ 0.28
PCDHA1-201ENST00000378133 CHRNGP07510 517 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 SAT1P21673 171 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 IGFBP6P24592 240 aaPredicted RBP16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 MPSTP25325 297 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 PPARGP37231 505 aaPredicted RBP16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 CD97P48960 835 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 MAP3K7CLP57077 242 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 NUP107P57740 925 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 LILRA4P59901 499 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 SEL1L3Q68CR1 1132 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 OSBPL11Q9BXB4 747 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 TMEM221A6NGB7 291 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 H3BNH8 94 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 BOLA2-SMG1P6H3BVE0 249 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 HDAC3O15379 428 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 MPOP05164 745 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 FYNP06241 537 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 VARSP26640 1264 aaKnown RBP16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 CD68P34810 354 aaPredicted RBP16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 CCR10P46092 362 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 TKTL1P51854 596 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 NDST2P52849 883 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 NXNQ6DKJ4 435 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 DHRS4L2Q6PKH6 230 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 NPWQ8N729 165 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 GPRC5AQ8NFJ5 357 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 ZC3H15Q8WU90 426 aaKnown RBP16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 ZNF597Q96LX8 424 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 CASS4Q9NQ75 786 aa16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 IARS2Q9NSE4 1012 aaKnown RBP16.81■□□□□ 0.28
PCDHA1-201ENST00000378133 CSPG5O95196 566 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 DARSP14868 501 aaKnown RBP16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 ITGA7Q13683 1181 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 DGKDQ16760 1214 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 TMEM198Q66K66 360 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 CLEC20AQ6ZU45 233 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 CLEC14AQ86T13 490 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 KCNMB4Q86W47 210 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 OR6J1Q8NGC5 347 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 TMEM40Q8WWA1 233 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 RMND5BQ96G75 393 aaPredicted RBP16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 MED10Q9BTT4 135 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 MLPHQ9BV36 600 aaPredicted RBP16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 SUN2Q9UH99 717 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 SLC39A10Q9ULF5 831 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 AP4S1Q9Y587 144 aa16.8■□□□□ 0.28
PCDHA1-201ENST00000378133 RALGAPA2Q2PPJ7 1873 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms