RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 DSPP15924 2871 aaKnown RBP15□□□□□ -0.01
HDAC6-204ENST00000376643 SPTY2D1-AS1A0A0U1RR47 76 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 C2CD4BA6NLJ0 364 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 TRIM38O00635 465 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 FFAR2O15552 330 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 MT-CO3P00414 261 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 NME1P15531 152 aaKnown RBP15□□□□□ -0.01
HDAC6-204ENST00000376643 EIF2S3P41091 472 aaKnown RBP15□□□□□ -0.01
HDAC6-204ENST00000376643 INSM1Q01101 510 aaPredicted RBP15□□□□□ -0.01
HDAC6-204ENST00000376643 GRM3Q14832 879 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 EFHC2Q5JST6 749 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 MANEALQ5VSG8 457 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 SEL1L3Q68CR1 1132 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 ZCCHC8Q6NZY4 707 aaKnown RBP15□□□□□ -0.01
HDAC6-204ENST00000376643 ZNF354CQ86Y25 554 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 MARCH9Q86YJ5 346 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 SLC25A45Q8N413 288 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 EMC1Q8N766 993 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 NEK11Q8NG66 645 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 TPCN2Q8NHX9 752 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 TBATAQ96M53 351 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 PCMTD1Q96MG8 357 aaPredicted RBP15□□□□□ -0.01
HDAC6-204ENST00000376643 C11orf70Q9BRQ4 267 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 TM6SF2Q9BZW4 377 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 GANQ9H2C0 597 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 CATSPERBQ9H7T0 1116 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 FZD3Q9NPG1 666 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 GPR27Q9NS67 375 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 FAM207AQ9NSI2 230 aaPredicted RBP15□□□□□ -0.01
HDAC6-204ENST00000376643 ADAM22Q9P0K1 906 aa15□□□□□ -0.01
HDAC6-204ENST00000376643 FCF1Q9Y324 198 aaKnown RBP15□□□□□ -0.01
HDAC6-204ENST00000376643 KRIT1O00522 736 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 TPP1O14773 563 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 ZNF821O75541 412 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-204ENST00000376643 LRIG2O94898 1065 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 IGSF6O95976 241 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 PAK4O96013 591 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-204ENST00000376643 CSF2P04141 144 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 PLEKP08567 350 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-204ENST00000376643 GPD1P21695 349 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 HTR7P34969 479 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 RPIAP49247 311 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 THOP1P52888 689 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 JAM2P57087 298 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 YBEYP58557 167 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-204ENST00000376643 FMO1Q01740 532 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 KRT31Q15323 416 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 CCDC14Q49A88 953 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 INO80DQ53TQ3 878 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-204ENST00000376643 C2CD6Q53TS8 623 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 TRNP1Q6NT89 227 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 PARS2Q7L3T8 475 aaKnown RBP14.99□□□□□ -0.01
HDAC6-204ENST00000376643 SLFN11Q7Z7L1 901 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 NLRP14Q86W24 1093 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 PHF13Q86YI8 300 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-204ENST00000376643 C3orf20Q8ND61 904 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 WDR48Q8TAF3 677 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 FAM172AQ8WUF8 416 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 CENPIQ92674 756 aaPredicted RBP14.99□□□□□ -0.01
HDAC6-204ENST00000376643 EPAS1Q99814 870 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 C1QTNF2Q9BXJ5 285 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 VPS16Q9H269 839 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 TMPRSS4Q9NRS4 437 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 SPASTQ9UBP0 616 aa14.99□□□□□ -0.01
HDAC6-204ENST00000376643 C16orf96A6NNT2 1141 aa14.98□□□□□ -0.01
HDAC6-204ENST00000376643 TK2O00142 265 aa14.98□□□□□ -0.01
HDAC6-204ENST00000376643 KDELR3O43731 214 aa14.98□□□□□ -0.01
HDAC6-204ENST00000376643 XPAP23025 273 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-204ENST00000376643 UCNP55089 124 aa14.98□□□□□ -0.01
HDAC6-204ENST00000376643 CLDN2P57739 230 aa14.98□□□□□ -0.01
HDAC6-204ENST00000376643 YPEL5P62699 121 aa14.98□□□□□ -0.01
HDAC6-204ENST00000376643 C15orf59Q2T9L4 293 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-204ENST00000376643 MYLK3Q32MK0 819 aa14.98□□□□□ -0.01
HDAC6-204ENST00000376643 TBC1D25Q3MII6 688 aa14.98□□□□□ -0.01
HDAC6-204ENST00000376643 PARP15Q460N3 678 aa14.98□□□□□ -0.01
HDAC6-204ENST00000376643 SOWAHCQ53LP3 525 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-204ENST00000376643 CDKAL1Q5VV42 579 aa14.98□□□□□ -0.01
HDAC6-204ENST00000376643 SLC22A18ASQ8N1D0 253 aa14.98□□□□□ -0.01
HDAC6-204ENST00000376643 RTL3Q8N8U3 475 aaKnown RBP14.98□□□□□ -0.01
HDAC6-204ENST00000376643 LSM14AQ8ND56 463 aaKnown RBP14.98□□□□□ -0.01
HDAC6-204ENST00000376643 ZNF548Q8NEK5 533 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-204ENST00000376643 CXorf40AQ8TE69 158 aa14.98□□□□□ -0.01
HDAC6-204ENST00000376643 SLC20A1Q8WUM9 679 aa14.98□□□□□ -0.01
HDAC6-204ENST00000376643 APOLD1Q96LR9 279 aa14.98□□□□□ -0.01
HDAC6-204ENST00000376643 ZNF578Q96N58 590 aaPredicted RBP14.98□□□□□ -0.01
HDAC6-204ENST00000376643 IL12RB2Q99665 862 aa14.98□□□□□ -0.01
HDAC6-204ENST00000376643 NLRC4Q9NPP4 1024 aa14.98□□□□□ -0.01
HDAC6-204ENST00000376643 DNAI1Q9UI46 699 aa14.98□□□□□ -0.01
HDAC6-204ENST00000376643 SALL4Q9UJQ4 1053 aa14.98□□□□□ -0.01
HDAC6-204ENST00000376643 DOCK4Q8N1I0 1966 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 SIGLEC16A6NMB1 481 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 EIF3CLB5ME19 914 aaKnown RBP14.97□□□□□ -0.01
HDAC6-204ENST00000376643 GOLGA6L22H0YM25 854 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 K7ESM1 405 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 FGF10O15520 208 aaPredicted RBP14.97□□□□□ -0.01
HDAC6-204ENST00000376643 AQP9O43315 295 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 BUB1O43683 1085 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 OPA1O60313 960 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 BRINP1O60477 761 aa14.97□□□□□ -0.01
HDAC6-204ENST00000376643 UNGP13051 313 aaPredicted RBP14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms