RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 ADAM12O43184 909 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 KLHL41O60662 606 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 ZMPSTE24O75844 475 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 SERPINA6P08185 405 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 SBK3P0C264 359 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 CD1EP15812 388 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 CDC25CP30307 473 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 ZNF33AQ06730 810 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 FAM219BQ5XKK7 198 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 TIGD7Q6NT04 549 aaPredicted RBP16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 RANBP10Q6VN20 620 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 RNF135Q8IUD6 432 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 DTX3LQ8TDB6 740 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 ELMO2Q96JJ3 720 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 CASD1Q96PB1 797 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 PRDM5Q9NQX1 630 aaPredicted RBP16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 MTF2Q9Y483 593 aaPredicted RBP16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 KCTD3Q9Y597 815 aa16.18■□□□□ 0.18
CNKSR1-202ENST00000374253 LOC100653049A0A140TA62 436 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 FAM95CA0A1B0GW59 222 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 EIF4E1BA6NMX2 242 aaKnown RBP16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 TMEM189-UBE2V1I3L0A0 370 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 NEMP1O14524 444 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 SIN3BO75182 1162 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 ZNF189O75820 626 aaPredicted RBP16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 KRT34O76011 436 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 KRT36O76013 467 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 UPP2O95045 317 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 GRK2P25098 689 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 MPSTP25325 297 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 THOC5Q13769 683 aaKnown RBP16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 PTPRCAPQ14761 206 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 SLC9B1Q4ZJI4 515 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 ACSBG2Q5FVE4 666 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 RBM20Q5T481 1227 aaKnown RBP16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 MARC1Q5VT66 337 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 CNSTQ6PJW8 725 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 CENPLQ8N0S6 344 aaPredicted RBP16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 BCL7CQ8WUZ0 217 aaPredicted RBP16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 NXNL1Q96CM4 212 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 THTPAQ9BU02 230 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 TUBB6Q9BUF5 446 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 C1QTNF1Q9BXJ1 281 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 COG4Q9H9E3 785 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 ENTPD7Q9NQZ7 604 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 TAGLN3Q9UI15 199 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 DOCK4Q8N1I0 1966 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 OR51F1A6NGY5 319 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 ZNF195O14628 629 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 PSMD3O43242 534 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 HNRNPCL1O60812 293 aaKnown RBP16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 ALDH2P05091 517 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 PIRTP0C851 137 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 TPBGLP0DKB5 382 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 SELPP16109 830 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 SLC25A3Q00325 362 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 DLG1Q12959 904 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 FUT10Q6P4F1 479 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 PGBD5Q8N414 524 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 FSTL5Q8N475 847 aaPredicted RBP16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 OSBPL1AQ9BXW6 950 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 CREBZFQ9NS37 354 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 LRFN2Q9ULH4 789 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 CDY1Q9Y6F8 540 aa16.17■□□□□ 0.18
CNKSR1-202ENST00000374253 TBKBP1A7MCY6 615 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 SPECC1L-ADORA2AF8WAN1 911 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 ARVCFO00192 962 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 SCAMP3O14828 347 aaKnown RBP16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 SYN3O14994 580 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 TRIM13O60858 407 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 NAGLUP54802 743 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 TAS2R39P59534 338 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 CFAP157Q5JU67 520 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 RABGAP1LQ5R372 815 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 MSANTD2Q6P1R3 559 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 KDELC1Q6UW63 502 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 PTAR1Q7Z6K3 402 aaPredicted RBP16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 PHTF2Q8N3S3 785 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 TMEM151AQ8N4L1 468 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 C1orf74Q96LT6 269 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 WDR55Q9H6Y2 383 aaPredicted RBP16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 XPR1Q9UBH6 696 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 MCM8Q9UJA3 840 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 MIA3Q5JRA6 1907 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 WFS1O76024 890 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 RHOQP17081 205 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 PAX3P23760 479 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 OR1E1P30953 314 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 GRIA4P48058 902 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 HARS2P49590 506 aaKnown RBP16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 FRG1Q14331 258 aaKnown RBP16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 UMODL1-AS1Q8N2C9 162 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 EFCAB3Q8N7B9 438 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 TDRD5Q8NAT2 981 aaKnown RBP16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 SH3TC2Q8TF17 1288 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 SLC25A51Q9H1U9 297 aa16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 GPBP1L1Q9HC44 474 aaPredicted RBP16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 HMX1Q9NP08 348 aaPredicted RBP16.16■□□□□ 0.18
CNKSR1-202ENST00000374253 UXTQ9UBK9 157 aaPredicted RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms