RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 RHOAP61586 193 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 SLC26A9Q7LBE3 791 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 LENG8Q96PV6 779 aaPredicted RBP17.59■□□□□ 0.41
PTPRU-202ENST00000373779 BTBD9Q96Q07 612 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 GAD1Q99259 594 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 TMEM216Q9P0N5 145 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 FAM50BQ9Y247 325 aa17.59■□□□□ 0.41
PTPRU-202ENST00000373779 DHRS12A0PJE2 317 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 UGT1A9O60656 530 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 PRIM2P49643 509 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 PSEN2P49810 448 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 PCBP1Q15365 356 aaKnown RBP eCLIP17.58■□□□□ 0.41
PTPRU-202ENST00000373779 ZC3H12BQ5HYM0 836 aaKnown RBP17.58■□□□□ 0.41
PTPRU-202ENST00000373779 POTEHQ6S545 545 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 C8orf59Q8N0T1 100 aaPredicted RBP17.58■□□□□ 0.41
PTPRU-202ENST00000373779 EBF4Q9BQW3 602 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 UGT1A7Q9HAW7 530 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 UGT1A10Q9HAW8 530 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 UGT1A8Q9HAW9 530 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 GNEQ9Y223 722 aaKnown RBP17.58■□□□□ 0.41
PTPRU-202ENST00000373779 PCDHB12Q9Y5F1 795 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 MYH7P12883 1935 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 ATP6AP2A0A1C7CYW4 349 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 PDHXO00330 501 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 ATP6AP2O75787 350 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 ENDOD1O94919 500 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 RAB27AP51159 221 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 SLC7A2P52569 658 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 TNK2Q07912 1038 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 CDC16Q13042 620 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 TLK2Q86UE8 772 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 ZNF781Q8N8C0 355 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 OTUB1Q96FW1 271 aaPredicted RBP17.58■□□□□ 0.41
PTPRU-202ENST00000373779 PLGRKTQ9HBL7 147 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 SH3BP1Q9Y3L3 701 aa17.58■□□□□ 0.41
PTPRU-202ENST00000373779 ADM5C9JUS6 153 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 COL6A2P12110 1019 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 ZYG11AQ6WRX3 759 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 DNAJC14Q6Y2X3 702 aaPredicted RBP17.58■□□□□ 0.4
PTPRU-202ENST00000373779 GPSM1Q86YR5 675 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 DNAJB14Q8TBM8 379 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 RORBQ92753 470 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 BHMTQ93088 406 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 C1orf50Q9BV19 199 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 CDH9Q9ULB4 789 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 NRCAMQ92823 1304 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 GPR25O00155 361 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 FAM20BO75063 409 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 PIGRP01833 764 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 KRT6AP02538 564 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 KRT6BP04259 564 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 KRT6CP48668 564 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 MILR1Q7Z6M3 343 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 ZCCHC7Q8N3Z6 543 aaKnown RBP17.58■□□□□ 0.4
PTPRU-202ENST00000373779 CCDC185Q8N715 623 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 SETD9Q8NE22 299 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 MCRS1Q96EZ8 462 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 PDZD7Q9H5P4 517 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 MOSPD1Q9UJG1 213 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 SNAP91O60641 907 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 CPSF4O95639 269 aaKnown RBP17.58■□□□□ 0.4
PTPRU-202ENST00000373779 KRT75O95678 551 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 NELFEP18615 380 aaKnown RBP17.58■□□□□ 0.4
PTPRU-202ENST00000373779 AQP4P55087 323 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 KRR1Q13601 381 aaKnown RBP17.58■□□□□ 0.4
PTPRU-202ENST00000373779 KCTD21Q4G0X4 260 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 IL27RAQ6UWB1 636 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 CUZD1Q86UP6 607 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 ACSS2Q9NR19 701 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 LEF1Q9UJU2 399 aaPredicted RBP17.58■□□□□ 0.4
PTPRU-202ENST00000373779 PCDHB5Q9Y5E4 795 aa17.58■□□□□ 0.4
PTPRU-202ENST00000373779 SLC15A5A6NIM6 579 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 AP2A1O95782 977 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 TEX44Q53QW1 395 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 CARNMT1Q8N4J0 409 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 SVOPQ8N4V2 548 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 POLR1BQ9H9Y6 1135 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 SLC7A8Q9UHI5 535 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 PTGES3LE9PB15 166 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 H7C4K7 107 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 FESP07332 822 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 ADRA1BP35368 520 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 SOX6P35712 828 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 DEPDC1Q5TB30 811 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 SH3PXD2AQ5TCZ1 1133 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 BBS2Q9BXC9 721 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 FAM124BQ9H5Z6 455 aaPredicted RBP17.57■□□□□ 0.4
PTPRU-202ENST00000373779 CNGB3Q9NQW8 809 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 ARHGEF4Q9NR80 690 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 SPASTQ9UBP0 616 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 POMPQ9Y244 141 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 PCDHB7Q9Y5E2 793 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 RPLP2P05387 115 aaKnown RBP17.57■□□□□ 0.4
PTPRU-202ENST00000373779 HGFP14210 728 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 C6orf52Q5T4I8 152 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 IQSEC1Q6DN90 963 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 ZNF280DQ6N043 979 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 SIAH1Q8IUQ4 282 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 TOP6BLQ8N6T0 577 aa17.57■□□□□ 0.4
PTPRU-202ENST00000373779 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP17.57■□□□□ 0.42e-6■■□□□ 11.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms