RNA–Protein interactions for RNA: ENST00000373672.7

COL16A1-203, Transcript of collagen type XVI alpha 1 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL16A1, Length 5,736 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-203ENST00000373672 NUDT5Q9UKK9 219 aa18.22■□□□□ 0.51
COL16A1-203ENST00000373672 VWDEQ8N2E2 1590 aa18.22■□□□□ 0.51
COL16A1-203ENST00000373672 NRCAMQ92823 1304 aa18.22■□□□□ 0.51
COL16A1-203ENST00000373672 HMGB3O15347 200 aaKnown RBP18.22■□□□□ 0.51
COL16A1-203ENST00000373672 CCNB1P14635 433 aa18.22■□□□□ 0.51
COL16A1-203ENST00000373672 TTPAP49638 278 aa18.22■□□□□ 0.51
COL16A1-203ENST00000373672 CRADDP78560 199 aa18.22■□□□□ 0.51
COL16A1-203ENST00000373672 TSHZ1Q6ZSZ6 1077 aa18.22■□□□□ 0.51
COL16A1-203ENST00000373672 UBASH3BQ8TF42 649 aa18.22■□□□□ 0.51
COL16A1-203ENST00000373672 MKL1Q969V6 931 aa18.22■□□□□ 0.51
COL16A1-203ENST00000373672 PPP3R2Q96LZ3 170 aa18.22■□□□□ 0.51
COL16A1-203ENST00000373672 SLC28A1O00337 649 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 SCNN1GP51170 649 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 SNRPD1P62314 119 aaKnown RBP18.21■□□□□ 0.51
COL16A1-203ENST00000373672 SPIRE1Q08AE8 756 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 PCBP1Q15365 356 aaKnown RBP eCLIP18.21■□□□□ 0.51
COL16A1-203ENST00000373672 TAF5Q15542 800 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 LRRC55Q6ZSA7 311 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 FAM20CQ8IXL6 584 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 MAGEE2Q8TD90 523 aaPredicted RBP18.21■□□□□ 0.51
COL16A1-203ENST00000373672 FNIP1Q8TF40 1166 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 ASB8Q9H765 288 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 VPS45Q9NRW7 570 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 CHKBQ9Y259 395 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 H7C0S8 307 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 MAPK10P53779 464 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 SLC25A3Q00325 362 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 TTC23Q5W5X9 447 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 FOXR1Q6PIV2 292 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 B3GNT6Q6ZMB0 384 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 CLYBLQ8N0X4 340 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 MRPL57Q9BQC6 102 aaKnown RBP18.21■□□□□ 0.51
COL16A1-203ENST00000373672 ZYG11BQ9C0D3 744 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 MRPL17Q9NRX2 175 aaKnown RBP18.21■□□□□ 0.51
COL16A1-203ENST00000373672 TRIM38O00635 465 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 NAGLUP54802 743 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 RAB10P61026 200 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 PSME3P61289 254 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 PDK4Q16654 411 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 TTC27Q6P3X3 843 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 ZNF662Q6ZS27 426 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 SUSD6Q92537 303 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 CNGB3Q9NQW8 809 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 BIRC5O15392 142 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 TPGS1Q6ZTW0 290 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 IKBIPQ70UQ0 350 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 CROCCP3Q8IVE0 287 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 CSGALNACT1Q8TDX6 532 aa18.21■□□□□ 0.51
COL16A1-203ENST00000373672 PTCD3Q96EY7 689 aaKnown RBP18.21■□□□□ 0.51
COL16A1-203ENST00000373672 MAFO75444 373 aaPredicted RBP18.2■□□□□ 0.5
COL16A1-203ENST00000373672 OR6B1O95007 311 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 CALCAP01258 141 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 GRIA3P42263 894 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 IRAK1BP1Q5VVH5 260 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 KIAA0408Q6ZU52 694 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 PACS2Q86VP3 889 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 SLC9A9Q8IVB4 645 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 FBXW8Q8N3Y1 598 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 RTL3Q8N8U3 475 aaKnown RBP18.2■□□□□ 0.5
COL16A1-203ENST00000373672 TMEM161BQ8NDZ6 487 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 ZFP28Q8NHY6 868 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 CXorf40AQ8TE69 158 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 AHCYL2Q96HN2 611 aaKnown RBP18.2■□□□□ 0.5
COL16A1-203ENST00000373672 SLC39A8Q9C0K1 460 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 WARSP23381 471 aaKnown RBP18.2■□□□□ 0.5
COL16A1-203ENST00000373672 PSEN1P49768 467 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 ERBB2P04626 1255 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 FMO1Q01740 532 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 HECTD3Q5T447 861 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 POLNQ7Z5Q5 900 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 RP9Q8TA86 221 aaKnown RBP18.2■□□□□ 0.5
COL16A1-203ENST00000373672 COG5Q9UP83 839 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 ANGPT4Q9Y264 503 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 UBIAD1Q9Y5Z9 338 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 CLUHO75153 1309 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 PTPRAP18433 802 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 VSIG10LQ86VR7 867 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 NELL1Q92832 810 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 SKA1Q96BD8 255 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 ACO2Q99798 780 aaKnown RBP18.2■□□□□ 0.5
COL16A1-203ENST00000373672 NUAK2Q9H093 628 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 LRMDAQ9H2I8 198 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 GGA2Q9UJY4 613 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 DEPDC5O75140 1603 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 hCG_1818297A0A087WSY0 165 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 RGSL1A5PLK6 1076 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 PDE2AO00408 941 aaPredicted RBP18.2■□□□□ 0.5
COL16A1-203ENST00000373672 KLRC4O43908 158 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 MAGEC1O60732 1142 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 PEX11AO75192 247 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 DDNO94850 711 aaPredicted RBP18.2■□□□□ 0.5
COL16A1-203ENST00000373672 CAPN1P07384 714 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 TLX1P31314 330 aaPredicted RBP18.2■□□□□ 0.5
COL16A1-203ENST00000373672 BNIP2Q12982 314 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 ZSWIM7Q19AV6 140 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 PMF1Q6P1K2 205 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 ZNF671Q8TAW3 534 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 HAS1Q92839 578 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 FAIM2Q9BWQ8 316 aa18.2■□□□□ 0.5
COL16A1-203ENST00000373672 RAP2CQ9Y3L5 183 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms