RNA–Protein interactions for RNA: ENST00000373514.2

CDX4-201, Transcript of caudal type homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX4, Length 1,515 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4-201ENST00000373514 HCN4Q9Y3Q4 1203 aa18.81■□□□□ 0.6
CDX4-201ENST00000373514 V9GYY5 206 aaPredicted RBP18.81■□□□□ 0.6
CDX4-201ENST00000373514 APOC4-APOC2K7ER74 178 aa18.8■□□□□ 0.6
CDX4-201ENST00000373514 MCF2LO15068 1137 aa18.8■□□□□ 0.6
CDX4-201ENST00000373514 MID1O15344 667 aa18.8■□□□□ 0.6
CDX4-201ENST00000373514 IL1BP01584 269 aa18.8■□□□□ 0.6
CDX4-201ENST00000373514 APOC2P02655 101 aa18.8■□□□□ 0.6
CDX4-201ENST00000373514 FGGP02679 453 aa18.8■□□□□ 0.6
CDX4-201ENST00000373514 MAXP61244 160 aa18.8■□□□□ 0.6
CDX4-201ENST00000373514 OTUD4Q01804 1114 aaKnown RBP18.8■□□□□ 0.6
CDX4-201ENST00000373514 C2orf54Q08AI8 447 aa18.8■□□□□ 0.6
CDX4-201ENST00000373514 AP1B1Q10567 949 aa18.8■□□□□ 0.6
CDX4-201ENST00000373514 CST6Q15828 149 aa18.8■□□□□ 0.6
CDX4-201ENST00000373514 CCDC13Q8IYE1 715 aa18.8■□□□□ 0.6
CDX4-201ENST00000373514 SPATA4Q8NEY3 305 aa18.8■□□□□ 0.6
CDX4-201ENST00000373514 PIP4K2CQ8TBX8 421 aa18.8■□□□□ 0.6
CDX4-201ENST00000373514 P3H4Q92791 437 aa18.8■□□□□ 0.6
CDX4-201ENST00000373514 GDAP1L1Q96MZ0 367 aa18.8■□□□□ 0.6
CDX4-201ENST00000373514 C10orf88Q9H8K7 445 aa18.8■□□□□ 0.6
CDX4-201ENST00000373514 FBRSQ9HAH7 460 aa18.8■□□□□ 0.6
CDX4-201ENST00000373514 ZSCAN32Q9NX65 697 aa18.8■□□□□ 0.6
CDX4-201ENST00000373514 IL36AQ9UHA7 158 aa18.8■□□□□ 0.6
CDX4-201ENST00000373514 EVLQ9UI08 416 aaPredicted RBP18.8■□□□□ 0.6
CDX4-201ENST00000373514 KCNK1O00180 336 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 IGSF6O95976 241 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 MX2P20592 715 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 BCKDHBP21953 392 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 CCNCP24863 283 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 CHRNA3P32297 505 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 RECQLP46063 649 aaPredicted RBP18.79■□□□□ 0.6
CDX4-201ENST00000373514 SNRPD1P62314 119 aaKnown RBP18.79■□□□□ 0.6
CDX4-201ENST00000373514 ZBTB17Q13105 803 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 KLF1Q13351 362 aaPredicted RBP18.79■□□□□ 0.6
CDX4-201ENST00000373514 ZNF235Q14590 738 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 NOMO1Q15155 1222 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 ADAT2Q7Z6V5 191 aaKnown RBP18.79■□□□□ 0.6
CDX4-201ENST00000373514 FAM124AQ86V42 546 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 AADATQ8N5Z0 425 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 ZBTB44Q8NCP5 570 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 ACTL9Q8TC94 416 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 CCDC114Q96M63 670 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 NSMCE3Q96MG7 304 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 ZNF599Q96NL3 588 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 TSGA13Q96PP4 275 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 PRRX2Q99811 253 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 PABPC3Q9H361 631 aaKnown RBP18.79■□□□□ 0.6
CDX4-201ENST00000373514 USP36Q9P275 1121 aaKnown RBP18.79■□□□□ 0.6
CDX4-201ENST00000373514 R3HDM2Q9Y2K5 976 aaKnown RBP18.79■□□□□ 0.6
CDX4-201ENST00000373514 ABCA7Q8IZY2 2146 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 LRRK1Q38SD2 2015 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 DOCK9Q9BZ29 2069 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 A0A1W2PP55 124 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 KRIT1O00522 736 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 PPP1R12AO14974 1030 aaPredicted RBP18.79■□□□□ 0.6
CDX4-201ENST00000373514 ALOX15BO15296 676 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 ZBTB24O43167 697 aaPredicted RBP18.79■□□□□ 0.6
CDX4-201ENST00000373514 LEFTY1O75610 366 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 PIGNO95427 931 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 DNTTP04053 509 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 CETN2P41208 172 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 MMP13P45452 471 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 TPMTP51580 245 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 RFTN1Q14699 578 aaPredicted RBP18.79■□□□□ 0.6
CDX4-201ENST00000373514 PDK1Q15118 436 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 PRKD1Q15139 912 aaPredicted RBP18.79■□□□□ 0.6
CDX4-201ENST00000373514 LONRF2Q1L5Z9 754 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 MAP7D1Q3KQU3 841 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 ARSIQ5FYB1 569 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 TEX35Q5T0J7 233 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 TIGD7Q6NT04 549 aaPredicted RBP18.79■□□□□ 0.6
CDX4-201ENST00000373514 METTL3Q86U44 580 aaKnown RBP18.79■□□□□ 0.6
CDX4-201ENST00000373514 LRRC49Q8IUZ0 686 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 NOA1Q8NC60 698 aaKnown RBP18.79■□□□□ 0.6
CDX4-201ENST00000373514 MAML1Q92585 1016 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 ARRDC3Q96B67 414 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 HEPHQ9BQS7 1158 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 FAM126AQ9BYI3 521 aaPredicted RBP18.79■□□□□ 0.6
CDX4-201ENST00000373514 NT5MQ9NPB1 228 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 SEPT10Q9P0V9 454 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 SEPT3Q9UH03 358 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 MBD1Q9UIS9 605 aaPredicted RBP18.79■□□□□ 0.6
CDX4-201ENST00000373514 PPM1HQ9ULR3 514 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 EFR3BQ9Y2G0 817 aa18.79■□□□□ 0.6
CDX4-201ENST00000373514 CACNA1HO95180 2353 aa18.78■□□□□ 0.6
CDX4-201ENST00000373514 PLXNA2O75051 1894 aa18.78■□□□□ 0.6
CDX4-201ENST00000373514 CCDC163A0A0D9SF12 145 aa18.78■□□□□ 0.6
CDX4-201ENST00000373514 KPNA3O00505 521 aaPredicted RBP18.78■□□□□ 0.6
CDX4-201ENST00000373514 MATN3O15232 486 aa18.78■□□□□ 0.6
CDX4-201ENST00000373514 HRO43593 1189 aa18.78■□□□□ 0.6
CDX4-201ENST00000373514 RNASEH1O60930 286 aaKnown RBP18.78■□□□□ 0.6
CDX4-201ENST00000373514 LILRB5O75023 590 aa18.78■□□□□ 0.6
CDX4-201ENST00000373514 HLA-DQB2P05538 268 aa18.78■□□□□ 0.6
CDX4-201ENST00000373514 ACADMP11310 421 aa18.78■□□□□ 0.6
CDX4-201ENST00000373514 SLC8A1P32418 973 aa18.78■□□□□ 0.6
CDX4-201ENST00000373514 P2RY2P41231 377 aa18.78■□□□□ 0.6
CDX4-201ENST00000373514 PTPN5P54829 565 aa18.78■□□□□ 0.6
CDX4-201ENST00000373514 NRLP54845 237 aa18.78■□□□□ 0.6
CDX4-201ENST00000373514 NAA30Q147X3 362 aaPredicted RBP18.78■□□□□ 0.6
CDX4-201ENST00000373514 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.78■□□□□ 0.6
CDX4-201ENST00000373514 UBXN4Q92575 508 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms