RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 SAR1AQ9NR31 198 aa18.11■□□□□ 0.49
CTSA-204ENST00000372484 TREX1Q9NSU2 369 aa18.11■□□□□ 0.49
CTSA-204ENST00000372484 AFF4Q9UHB7 1163 aaKnown RBP18.11■□□□□ 0.49
CTSA-204ENST00000372484 TTC24A2A3L6 582 aaPredicted RBP18.1■□□□□ 0.49
CTSA-204ENST00000372484 ZNF840PA6NDX5 716 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 ACSL4O60488 711 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 DNAJC6O75061 913 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 HAUS5O94927 633 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 GJB5O95377 273 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 SEC24AO95486 1093 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 SERPINE1P05121 402 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 MMP2P08253 660 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 CPA3P15088 417 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 SLC1A6P48664 564 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 SERPINH1P50454 418 aaKnown RBP18.1■□□□□ 0.49
CTSA-204ENST00000372484 RASSF2P50749 326 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 THOC5Q13769 683 aaKnown RBP18.1■□□□□ 0.49
CTSA-204ENST00000372484 LBRQ14739 615 aaKnown RBP18.1■□□□□ 0.49
CTSA-204ENST00000372484 CTC1Q2NKJ3 1217 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 HECTD3Q5T447 861 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 CNKSR3Q6P9H4 555 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 CLEC14AQ86T13 490 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 ZNF461Q8TAF7 563 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 OVCA2Q8WZ82 227 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 ATP13A1Q9HD20 1204 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 STK38LQ9Y2H1 464 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 HEATR9A2RTY3 570 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 ITM2AO43736 263 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 LYPLA1O75608 230 aaPredicted RBP18.1■□□□□ 0.49
CTSA-204ENST00000372484 GRK2P25098 689 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 GABRB3P28472 473 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 SLC6A4P31645 630 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 SLC11A2P49281 568 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 AQP5P55064 265 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 MPP1Q00013 466 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 TNK2Q07912 1038 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 USP10Q14694 798 aaKnown RBP18.1■□□□□ 0.49
CTSA-204ENST00000372484 SNX30Q5VWJ9 437 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 KIAA0930Q6ICG6 404 aaPredicted RBP18.1■□□□□ 0.49
CTSA-204ENST00000372484 PGBD5Q8N414 524 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 TLK1Q9UKI8 766 aa18.1■□□□□ 0.49
CTSA-204ENST00000372484 COCHO43405 550 aa18.09■□□□□ 0.49
CTSA-204ENST00000372484 RALBP11234 206 aa18.09■□□□□ 0.49
CTSA-204ENST00000372484 SNCBQ16143 134 aa18.09■□□□□ 0.49
CTSA-204ENST00000372484 INPP5DQ92835 1189 aa18.09■□□□□ 0.49
CTSA-204ENST00000372484 WWP1Q9H0M0 922 aa18.09■□□□□ 0.49
CTSA-204ENST00000372484 CYP4F11Q9HBI6 524 aa18.09■□□□□ 0.49
CTSA-204ENST00000372484 NMRAL1Q9HBL8 299 aa18.09■□□□□ 0.49
CTSA-204ENST00000372484 UXTQ9UBK9 157 aaPredicted RBP18.09■□□□□ 0.49
CTSA-204ENST00000372484 PRAMEF11O60813 436 aa18.08■□□□□ 0.49
CTSA-204ENST00000372484 SOD2P04179 222 aa18.08■□□□□ 0.49
CTSA-204ENST00000372484 HMGA1P17096 107 aaKnown RBP18.08■□□□□ 0.49
CTSA-204ENST00000372484 SLC1A2P43004 574 aa18.08■□□□□ 0.49
CTSA-204ENST00000372484 MNX1P50219 401 aaPredicted RBP18.08■□□□□ 0.49
CTSA-204ENST00000372484 CDK18Q07002 472 aa18.08■□□□□ 0.49
CTSA-204ENST00000372484 SLC20A2Q08357 652 aa18.08■□□□□ 0.49
CTSA-204ENST00000372484 IHHQ14623 411 aa18.08■□□□□ 0.49
CTSA-204ENST00000372484 TAF12Q16514 161 aa18.08■□□□□ 0.49
CTSA-204ENST00000372484 C5orf22Q49AR2 442 aa18.08■□□□□ 0.49
CTSA-204ENST00000372484 TMCO4Q5TGY1 634 aa18.08■□□□□ 0.49
CTSA-204ENST00000372484 ZNF470Q6ECI4 717 aa18.08■□□□□ 0.49
CTSA-204ENST00000372484 ALYREFQ86V81 257 aaKnown RBP18.08■□□□□ 0.49
CTSA-204ENST00000372484 DENND1CQ8IV53 801 aa18.08■□□□□ 0.49
CTSA-204ENST00000372484 ARRDC2Q8TBH0 407 aa18.08■□□□□ 0.49
CTSA-204ENST00000372484 SLC7A6OSQ96CW6 309 aaPredicted RBP18.08■□□□□ 0.49
CTSA-204ENST00000372484 RAB3IPQ96QF0 476 aaPredicted RBP18.08■□□□□ 0.49
CTSA-204ENST00000372484 FAM167BQ9BTA0 163 aa18.08■□□□□ 0.49
CTSA-204ENST00000372484 POLR1EQ9GZS1 481 aaKnown RBP18.08■□□□□ 0.49
CTSA-204ENST00000372484 ATP11BQ9Y2G3 1177 aa18.08■□□□□ 0.49
CTSA-204ENST00000372484 CHD5Q8TDI0 1954 aa18.08■□□□□ 0.49
CTSA-204ENST00000372484 A0A0D9SEW6 157 aa18.08■□□□□ 0.48
CTSA-204ENST00000372484 ABLIM3O94929 683 aa18.08■□□□□ 0.48
CTSA-204ENST00000372484 ALDH1A3P47895 512 aa18.08■□□□□ 0.48
CTSA-204ENST00000372484 ITGA9Q13797 1035 aa18.08■□□□□ 0.48
CTSA-204ENST00000372484 ZNF235Q14590 738 aa18.08■□□□□ 0.48
CTSA-204ENST00000372484 HSF5Q4G112 596 aaPredicted RBP18.08■□□□□ 0.48
CTSA-204ENST00000372484 ARMC3Q5W041 872 aa18.08■□□□□ 0.48
CTSA-204ENST00000372484 FAM117BQ6P1L5 589 aa18.08■□□□□ 0.48
CTSA-204ENST00000372484 KLHDC10Q6PID8 442 aa18.08■□□□□ 0.48
CTSA-204ENST00000372484 WDR75Q8IWA0 830 aaKnown RBP18.08■□□□□ 0.48
CTSA-204ENST00000372484 PIWIL2Q8TC59 973 aaKnown RBP18.08■□□□□ 0.48
CTSA-204ENST00000372484 PPP4R1Q8TF05 950 aa18.08■□□□□ 0.48
CTSA-204ENST00000372484 PRR11Q96HE9 360 aaPredicted RBP18.08■□□□□ 0.48
CTSA-204ENST00000372484 TMEM169Q96HH4 297 aa18.08■□□□□ 0.48
CTSA-204ENST00000372484 SEMA3CQ99985 751 aa18.08■□□□□ 0.48
CTSA-204ENST00000372484 TRPM5Q9NZQ8 1165 aa18.08■□□□□ 0.48
CTSA-204ENST00000372484 TBX21Q9UL17 535 aa18.08■□□□□ 0.48
CTSA-204ENST00000372484 ANKRD6Q9Y2G4 727 aa18.08■□□□□ 0.48
CTSA-204ENST00000372484 DNAJC16Q9Y2G8 782 aa18.08■□□□□ 0.48
CTSA-204ENST00000372484 ZFP37Q9Y6Q3 630 aaPredicted RBP18.08■□□□□ 0.48
CTSA-204ENST00000372484 MKI67P46013 3256 aaKnown RBP18.08■□□□□ 0.48
CTSA-204ENST00000372484 FCHO1O14526 889 aa18.07■□□□□ 0.48
CTSA-204ENST00000372484 PHGDHO43175 533 aaKnown RBP18.07■□□□□ 0.48
CTSA-204ENST00000372484 SIN3BO75182 1162 aa18.07■□□□□ 0.48
CTSA-204ENST00000372484 AVPR1AP37288 418 aa18.07■□□□□ 0.48
CTSA-204ENST00000372484 CSRP3P50461 194 aa18.07■□□□□ 0.48
CTSA-204ENST00000372484 RABGAP1LQ5R372 815 aa18.07■□□□□ 0.48
CTSA-204ENST00000372484 NEPROQ6NW34 567 aa18.07■□□□□ 0.48
CTSA-204ENST00000372484 TMCO2Q7Z6W1 182 aaPredicted RBP18.07■□□□□ 0.48
CTSA-204ENST00000372484 TTC7BQ86TV6 843 aa18.07■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms