RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 PCDHA3Q9Y5H8 950 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 KANTRA0A1W2PQU2 76 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 OR6C70A6NIJ9 312 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 PGRP06401 933 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 RNF44Q7L0R7 432 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 P2RY8Q86VZ1 359 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 OAS3Q9Y6K5 1087 aaKnown RBP15.41■□□□□ 0.06
COL5A1-201ENST00000371817 BCKDKO14874 412 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 ERVK-10P10266 1014 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 ERVK-9P63128 1117 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 SPOCD1Q6ZMY3 1216 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 GPALPP1Q8IXQ4 340 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 VAPBO95292 243 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 NCCRP1Q6ZVX7 275 aaPredicted RBP15.41■□□□□ 0.06
COL5A1-201ENST00000371817 ZNF518BQ9C0D4 1074 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 RDH8Q9NYR8 311 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 PIN4Q9Y237 131 aaKnown RBP15.41■□□□□ 0.06
COL5A1-201ENST00000371817 MYH14Q7Z406 1995 aaKnown RBP15.41■□□□□ 0.06
COL5A1-201ENST00000371817 TIE1P35590 1138 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 EIF5AL1Q6IS14 154 aaKnown RBP15.41■□□□□ 0.06
COL5A1-201ENST00000371817 RBM43Q6ZSC3 357 aaKnown RBP15.41■□□□□ 0.06
COL5A1-201ENST00000371817 SLC47A2Q86VL8 602 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 HERC6Q8IVU3 1022 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 STARD7Q9NQZ5 370 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 ABCC10Q5T3U5 1492 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 H0Y858 1186 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 NELFEP18615 380 aaKnown RBP15.41■□□□□ 0.06
COL5A1-201ENST00000371817 UGT1A5P35504 534 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 RPP38P78345 283 aaKnown RBP15.41■□□□□ 0.06
COL5A1-201ENST00000371817 SENP6Q9GZR1 1112 aaPredicted RBP15.41■□□□□ 0.06
COL5A1-201ENST00000371817 MAU2Q9Y6X3 613 aa15.41■□□□□ 0.06
COL5A1-201ENST00000371817 SLC30A4O14863 429 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 THEGLP0DJG4 465 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 MTHFRP42898 656 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 TOR1AIP2Q8NFQ8 470 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 SH3BP1Q9Y3L3 701 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 TCOF1Q13428 1488 aaKnown RBP15.4■□□□□ 0.06
COL5A1-201ENST00000371817 LSM8O95777 96 aaKnown RBP15.4■□□□□ 0.06
COL5A1-201ENST00000371817 DNTTP04053 509 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 IL2P60568 153 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 FAAP100Q0VG06 881 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 QRICH1Q2TAL8 776 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 DUS1LQ6P1R4 473 aaKnown RBP15.4■□□□□ 0.06
COL5A1-201ENST00000371817 KCNV1Q6PIU1 500 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 CREG2Q8IUH2 290 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 APOL2Q9BQE5 337 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 SLC22A4Q9H015 551 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 SGPL1O95470 568 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 LPCAT4Q643R3 524 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 CXorf21Q9HAI6 301 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 CAPN8A6NHC0 703 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 KMOO15229 486 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 GSC2O15499 205 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 ITGALP20701 1170 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 PRKCEQ02156 737 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 CDH17Q12864 832 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 GARNL3Q5VVW2 1013 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 GET4Q7L5D6 327 aaPredicted RBP15.4■□□□□ 0.06
COL5A1-201ENST00000371817 ATP6V0D2Q8N8Y2 350 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 PCDH19Q8TAB3 1148 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 C12orf43Q96C57 262 aaKnown RBP15.4■□□□□ 0.06
COL5A1-201ENST00000371817 CYP3A43Q9HB55 503 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 ZNF451Q9Y4E5 1061 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 COX7A2P14406 83 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 AADACL4Q5VUY2 407 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 TMEM17Q86X19 198 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 ERI1Q8IV48 349 aaKnown RBP15.4■□□□□ 0.06
COL5A1-201ENST00000371817 APBA2Q99767 749 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 GGA3Q9NZ52 723 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 AIREO43918 545 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 ZNF14P17017 642 aaPredicted RBP15.4■□□□□ 0.06
COL5A1-201ENST00000371817 ZNF267Q14586 743 aaPredicted RBP15.4■□□□□ 0.06
COL5A1-201ENST00000371817 HSD17B12Q53GQ0 312 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 RNASE12Q5GAN4 147 aaKnown RBP15.4■□□□□ 0.06
COL5A1-201ENST00000371817 GPSM1Q86YR5 675 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 ZSCAN5AQ9BUG6 496 aa15.4■□□□□ 0.06
COL5A1-201ENST00000371817 MAGEB3O15480 346 aa15.39■□□□□ 0.06
COL5A1-201ENST00000371817 NUDT14O95848 222 aa15.39■□□□□ 0.06
COL5A1-201ENST00000371817 RRP1BQ14684 758 aaKnown RBP15.39■□□□□ 0.06
COL5A1-201ENST00000371817 WDR59Q6PJI9 974 aa15.39■□□□□ 0.06
COL5A1-201ENST00000371817 PLCZ1Q86YW0 608 aa15.39■□□□□ 0.06
COL5A1-201ENST00000371817 SYNPOQ8N3V7 929 aa15.39■□□□□ 0.06
COL5A1-201ENST00000371817 SCAF8Q9UPN6 1271 aaKnown RBP15.39■□□□□ 0.06
COL5A1-201ENST00000371817 ENTPD4Q9Y227 616 aa15.39■□□□□ 0.06
COL5A1-201ENST00000371817 OR10H3O60404 316 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 TADA2AO75478 443 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 FXR2P51116 673 aaKnown RBP eCLIP15.39■□□□□ 0.05
COL5A1-201ENST00000371817 ARFIP1P53367 373 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 CLYBLQ8N0X4 340 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 PRKD2Q9BZL6 878 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 CHIAQ9BZP6 476 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 CCDC86Q9H6F5 360 aaKnown RBP15.39■□□□□ 0.05
COL5A1-201ENST00000371817 FBXO6Q9NRD1 293 aaPredicted RBP15.39■□□□□ 0.05
COL5A1-201ENST00000371817 TBX1O43435 398 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 NRP2O60462 931 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 MYBPC1Q00872 1141 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 RIPPLY1Q0D2K3 151 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 STARD3Q14849 445 aa15.39■□□□□ 0.05
COL5A1-201ENST00000371817 OGFRL1Q5TC84 451 aaPredicted RBP15.39■□□□□ 0.05
COL5A1-201ENST00000371817 MTSS1LQ765P7 747 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms