RNA–Protein interactions for RNA: ENST00000369530.5

CSDE1-204, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,774 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-204ENST00000369530 B3GNT4Q9C0J1 378 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 LHX5Q9H2C1 402 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 NMUR1Q9HB89 426 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 FGFR1OP2Q9NVK5 253 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 ASNSD1Q9NWL6 643 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 ANKFY1Q9P2R3 1169 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 LRFN2Q9ULH4 789 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 COQ6Q9Y2Z9 468 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 DMXL2Q8TDJ6 3036 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 CENPBD1B2RD01 187 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 CASQ2O14958 399 aaPredicted RBP7□□□□□ -1.29
CSDE1-204ENST00000369530 CNOT3O75175 753 aaKnown RBP7□□□□□ -1.29
CSDE1-204ENST00000369530 FGF19O95750 216 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 UQCRBP14927 111 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 STAT1P42224 750 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 OR1G1P47890 313 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 VAMP7P51809 220 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 CDC16Q13042 620 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 PPP1R26Q5T8A7 1209 aaPredicted RBP7□□□□□ -1.29
CSDE1-204ENST00000369530 HGSNATQ68CP4 663 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 DUPD1Q68J44 220 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 B3GALNT2Q8NCR0 500 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 GABPB2Q8TAK5 448 aaPredicted RBP7□□□□□ -1.29
CSDE1-204ENST00000369530 GIPC2Q8TF65 315 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 HSPBAP1Q96EW2 488 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 OLFM1Q99784 485 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 C2orf49Q9BVC5 232 aaPredicted RBP7□□□□□ -1.29
CSDE1-204ENST00000369530 CADM1Q9BY67 442 aaKnown RBP7□□□□□ -1.29
CSDE1-204ENST00000369530 SMARCAL1Q9NZC9 954 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 ARHGAP20Q9P2F6 1191 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 LGALS13Q9UHV8 139 aa7□□□□□ -1.29
CSDE1-204ENST00000369530 FAM221BA6H8Z2 402 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 CAPN9O14815 690 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 TRMUO75648 421 aaKnown RBP6.99□□□□□ -1.29
CSDE1-204ENST00000369530 SULT1C4O75897 302 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 ZWINTO95229 277 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 LATS1O95835 1130 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 KLKB1P03952 638 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 C8BP07358 591 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 HNRNPLP14866 589 aaKnown RBP eCLIP6.99□□□□□ -1.295e-8■□□□□ 8.7
CSDE1-204ENST00000369530 NAGAP17050 411 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 EPHB2P29323 1055 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 ETV3P41162 512 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 FMO5P49326 533 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 ARSEP51690 589 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 RBP5P82980 135 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 MYL7Q01449 175 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 NHLH1Q02575 133 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 STRN3Q13033 797 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 AUHQ13825 339 aaKnown RBP6.99□□□□□ -1.29
CSDE1-204ENST00000369530 ZFYVE27Q5T4F4 411 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 INTS8Q75QN2 995 aaKnown RBP6.99□□□□□ -1.29
CSDE1-204ENST00000369530 FAM20CQ8IXL6 584 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 BAHD1Q8TBE0 780 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-204ENST00000369530 HCAR2Q8TDS4 363 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 FNBP1Q96RU3 617 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 GABRG3Q99928 467 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 FBRSL1Q9HCM7 1045 aaKnown RBP6.99□□□□□ -1.29
CSDE1-204ENST00000369530 EXOC7Q9UPT5 735 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 UTP11Q9Y3A2 253 aaKnown RBP6.99□□□□□ -1.29
CSDE1-204ENST00000369530 CEPT1Q9Y6K0 416 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 ANTXRLA6NF34 631 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 TCP11X1B4DZS4 312 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 CYB561D2O14569 222 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 HGSO14964 777 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-204ENST00000369530 TNNI1P19237 187 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 PON1P27169 355 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 RXRGP48443 463 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 TMED10P49755 219 aaKnown RBP6.99□□□□□ -1.29
CSDE1-204ENST00000369530 LIG4P49917 911 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 CHN2P52757 468 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 CHRNEQ04844 493 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 RNASELQ05823 741 aaKnown RBP6.99□□□□□ -1.29
CSDE1-204ENST00000369530 DMPKQ09013 629 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 TDGQ13569 410 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 LRP8Q14114 963 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 NR1D2Q14995 579 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 CCDC85BQ15834 202 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-204ENST00000369530 DUOXA2Q1HG44 320 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 TMEM215Q68D42 235 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 ASTLQ6HA08 431 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-204ENST00000369530 TXNDC11Q6PKC3 985 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 VASH1Q7L8A9 365 aaPredicted RBP6.99□□□□□ -1.29
CSDE1-204ENST00000369530 C12orf40Q86WS4 652 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 ADGRG2Q8IZP9 1017 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 AHI1Q8N157 1196 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 CPXM2Q8N436 756 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 METTL25Q8N6Q8 603 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 PCYOX1LQ8NBM8 494 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 DDI1Q8WTU0 396 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 C10orf82Q8WW14 230 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 MYLPFQ96A32 169 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 ELMO3Q96BJ8 720 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 MS4A14Q96JA4 679 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.99□□□□□ -1.29
CSDE1-204ENST00000369530 SLC27A6Q9Y2P4 619 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 IFT52Q9Y366 437 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 TSC22D4Q9Y3Q8 395 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 CCDC163A0A0D9SF12 145 aa6.99□□□□□ -1.29
CSDE1-204ENST00000369530 KRT36O76013 467 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms