RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 TLE6Q9H808 572 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 PIDD1Q9HB75 910 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.01□□□□□ -0.97
TPM3-213ENST00000368545 TMEM30AQ9NV96 361 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 TMEM51Q9NW97 253 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 IGSF9Q9P2J2 1179 aa9.01□□□□□ -0.97
TPM3-213ENST00000368545 TMEFF2Q9UIK5 374 aaPredicted RBP9.01□□□□□ -0.97
TPM3-213ENST00000368545 GRM6O15303 877 aa9□□□□□ -0.97
TPM3-213ENST00000368545 SEC31AO94979 1220 aaKnown RBP9□□□□□ -0.97
TPM3-213ENST00000368545 WISP1O95388 367 aa9□□□□□ -0.97
TPM3-213ENST00000368545 SP9P0CG40 484 aa9□□□□□ -0.97
TPM3-213ENST00000368545 RBP3P10745 1247 aa9□□□□□ -0.97
TPM3-213ENST00000368545 RDXP35241 583 aaKnown RBP9□□□□□ -0.97
TPM3-213ENST00000368545 MAGEA11P43364 429 aa9□□□□□ -0.97
TPM3-213ENST00000368545 SULT1E1P49888 294 aa9□□□□□ -0.97
TPM3-213ENST00000368545 CDH6P55285 790 aa9□□□□□ -0.97
TPM3-213ENST00000368545 GPR85P60893 370 aa9□□□□□ -0.97
TPM3-213ENST00000368545 MRPS25P82663 173 aaKnown RBP9□□□□□ -0.97
TPM3-213ENST00000368545 TFDP2Q14188 446 aa9□□□□□ -0.97
TPM3-213ENST00000368545 KRT81Q14533 505 aa9□□□□□ -0.97
TPM3-213ENST00000368545 DCAF6Q58WW2 860 aa9□□□□□ -0.97
TPM3-213ENST00000368545 KCNT1Q5JUK3 1230 aa9□□□□□ -0.97
TPM3-213ENST00000368545 ERMARDQ5T6L9 678 aa9□□□□□ -0.97
TPM3-213ENST00000368545 PM20D1Q6GTS8 502 aa9□□□□□ -0.97
TPM3-213ENST00000368545 LETMD1Q6P1Q0 360 aa9□□□□□ -0.97
TPM3-213ENST00000368545 SCYL2Q6P3W7 929 aa9□□□□□ -0.97
TPM3-213ENST00000368545 TTC27Q6P3X3 843 aa9□□□□□ -0.97
TPM3-213ENST00000368545 SLCO4C1Q6ZQN7 724 aa9□□□□□ -0.97
TPM3-213ENST00000368545 GPRIN1Q7Z2K8 1008 aa9□□□□□ -0.97
TPM3-213ENST00000368545 BNIPLQ7Z465 357 aa9□□□□□ -0.97
TPM3-213ENST00000368545 SPRED2Q7Z698 418 aa9□□□□□ -0.97
TPM3-213ENST00000368545 CEP57Q86XR8 500 aa9□□□□□ -0.97
TPM3-213ENST00000368545 DEFB106AQ8N104 65 aa9□□□□□ -0.97
TPM3-213ENST00000368545 CHST14Q8NCH0 376 aa9□□□□□ -0.97
TPM3-213ENST00000368545 CCHCR1Q8TD31 782 aa9□□□□□ -0.97
TPM3-213ENST00000368545 FRS2Q8WU20 508 aa9□□□□□ -0.97
TPM3-213ENST00000368545 CASKIN2Q8WXE0 1202 aa9□□□□□ -0.97
TPM3-213ENST00000368545 PGAP3Q96FM1 320 aaPredicted RBP9□□□□□ -0.97
TPM3-213ENST00000368545 NPY6RQ99463 290 aa9□□□□□ -0.97
TPM3-213ENST00000368545 ZNF670Q9BS34 389 aa9□□□□□ -0.97
TPM3-213ENST00000368545 HERPUD2Q9BSE4 406 aa9□□□□□ -0.97
TPM3-213ENST00000368545 SNRNP25Q9BV90 132 aaKnown RBP9□□□□□ -0.97
TPM3-213ENST00000368545 GPR62Q9BZJ7 368 aa9□□□□□ -0.97
TPM3-213ENST00000368545 CHST7Q9NS84 486 aa9□□□□□ -0.97
TPM3-213ENST00000368545 NPFFR2Q9Y5X5 522 aa9□□□□□ -0.97
TPM3-213ENST00000368545 ZSCAN5CA6NGD5 496 aaPredicted RBP8.99□□□□□ -0.97
TPM3-213ENST00000368545 YJEFN3A6XGL0 299 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 E7ENQ6 273 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 H0Y8X5 98 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 KRT10P13645 584 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 ITIH2P19823 946 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 TNNT3P45378 269 aaPredicted RBP8.99□□□□□ -0.97
TPM3-213ENST00000368545 CARSP49589 748 aaKnown RBP8.99□□□□□ -0.97
TPM3-213ENST00000368545 ARSEP51690 589 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 SLC5A3P53794 718 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 PPP1R7Q15435 360 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 DPYSL2Q16555 572 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 DUPD1Q68J44 220 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 ANKS1BQ7Z6G8 1248 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 FAM71BQ8TC56 605 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 SPPL2BQ8TCT7 592 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 C1orf54Q8WWF1 131 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 IFT81Q8WYA0 676 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 ZNF689Q96CS4 500 aaPredicted RBP8.99□□□□□ -0.97
TPM3-213ENST00000368545 CCDC114Q96M63 670 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 MIPEPQ99797 713 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 ZFYVE21Q9BQ24 234 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 ELAC2Q9BQ52 826 aaKnown RBP8.99□□□□□ -0.97
TPM3-213ENST00000368545 TRIM51Q9BSJ1 452 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 TTPALQ9BTX7 342 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 ASPNQ9BXN1 380 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 CALN1Q9BXU9 219 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 MAK16Q9BXY0 300 aaKnown RBP8.99□□□□□ -0.97
TPM3-213ENST00000368545 S1PR5Q9H228 398 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 CWH43Q9H720 699 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 MKS1Q9NXB0 559 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 DUSP12Q9UNI6 340 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 KIAA1671Q9BY89 1806 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 APOC4-APOC2K7ER74 178 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 TAF4O00268 1085 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 MAP2K7O14733 419 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 LIASO43766 372 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 F9P00740 461 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 APOC2P02655 101 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 NCAM1P13591 858 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 SESN3P58005 492 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 OCRLQ01968 901 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 KRT17Q04695 432 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 DEUP1Q05D60 604 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 PTK6Q13882 451 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 BYSLQ13895 437 aaKnown RBP8.99□□□□□ -0.97
TPM3-213ENST00000368545 DPYSL3Q14195 570 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 LLGL1Q15334 1064 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 TMEM95Q3KNT9 176 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 USP41Q3LFD5 358 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 RSPO2Q6UXX9 243 aaPredicted RBP8.99□□□□□ -0.97
TPM3-213ENST00000368545 C1orf229Q6ZS94 237 aaPredicted RBP8.99□□□□□ -0.97
TPM3-213ENST00000368545 BHLHA9Q7RTU4 235 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 RFX6Q8HWS3 928 aa8.99□□□□□ -0.97
TPM3-213ENST00000368545 GSPT2Q8IYD1 628 aaKnown RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms