RNA–Protein interactions for RNA: ENST00000367253.8

SYNE1-206, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 5,189 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-206ENST00000367253 MPZL3Q6UWV2 235 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 BNIPLQ7Z465 357 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 LRRC6Q86X45 466 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 RASGRP3Q8IV61 690 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 CDK20Q8IZL9 346 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 ENKURQ8TC29 256 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 ANKRD7Q92527 254 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 JADE3Q92613 823 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 APOL4Q9BPW4 351 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 ZNF717Q9BY31 904 aaPredicted RBP8.73□□□□□ -1.01
SYNE1-206ENST00000367253 TIMMDC1Q9NPL8 285 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 CEP72Q9P209 647 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 MALT1Q9UDY8 824 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 TSR3Q9UJK0 312 aaKnown RBP8.73□□□□□ -1.01
SYNE1-206ENST00000367253 SLC12A4Q9UP95 1085 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 WDR19Q8NEZ3 1342 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 TK2O00142 265 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 MTX2O75431 263 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 ECDO95905 644 aaPredicted RBP8.73□□□□□ -1.01
SYNE1-206ENST00000367253 PRNPP04156 253 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 PTPRAP18433 802 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 OC90Q02509 493 aaPredicted RBP8.73□□□□□ -1.01
SYNE1-206ENST00000367253 RAPSNQ13702 412 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 RASA2Q15283 850 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 PHF19Q5T6S3 580 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 CACUL1Q86Y37 369 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 PM20D2Q8IYS1 436 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 C18orf25Q96B23 403 aaPredicted RBP8.73□□□□□ -1.01
SYNE1-206ENST00000367253 PDLIM2Q96JY6 352 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 OSBPL8Q9BZF1 889 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 HHATLQ9HCP6 504 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 MAD2L2Q9UI95 211 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 DNMT3LQ9UJW3 386 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 PPIEQ9UNP9 301 aaKnown RBP8.73□□□□□ -1.01
SYNE1-206ENST00000367253 AP3M1Q9Y2T2 418 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 HEY1Q9Y5J3 304 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 FAM205AQ6ZU69 1335 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 PPP1R3GB7ZBB8 358 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 CBX4O00257 560 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 ZNF862O60290 1169 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 WFS1O76024 890 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 PLGP00747 810 aaPredicted RBP8.73□□□□□ -1.01
SYNE1-206ENST00000367253 CHRM3P20309 590 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 GABRR2P28476 465 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 PTPN9P43378 593 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 NAMPTP43490 491 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 GPR1P46091 355 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 BCAT1P54687 386 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 HSF2Q03933 536 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 PRKCZQ05513 592 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 DLG1Q12959 904 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 ALG1LQ6GMV1 187 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 ZNF296Q8WUU4 475 aaPredicted RBP8.73□□□□□ -1.01
SYNE1-206ENST00000367253 PMEPA1Q969W9 287 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 RFT1Q96AA3 541 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 TAMM41Q96BW9 452 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 STRBPQ96SI9 672 aaKnown RBP8.73□□□□□ -1.01
SYNE1-206ENST00000367253 SPATA9Q9BWV2 254 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 ATP13A1Q9HD20 1204 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 ARHGEF4Q9NR80 690 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 VPS45Q9NRW7 570 aa8.73□□□□□ -1.01
SYNE1-206ENST00000367253 LGALS16A8MUM7 142 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 EVPLLA8MZ36 301 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 TP73O15350 636 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 RGS10O43665 173 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 OR56A5P0C7T3 313 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 CYP2A7P20853 494 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 MRPS22P82650 360 aaKnown RBP8.72□□□□□ -1.01
SYNE1-206ENST00000367253 FOXK1P85037 733 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 NCF4Q15080 339 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 FBXO47Q5MNV8 452 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 ZNF618Q5T7W0 954 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 TIGD3Q6B0B8 471 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 PGBD2Q6P3X8 592 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 GRIN3AQ8TCU5 1115 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 FAM162AQ96A26 154 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 WDR18Q9BV38 432 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 PRKD2Q9BZL6 878 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 ALDH8A1Q9H2A2 487 aaPredicted RBP8.72□□□□□ -1.01
SYNE1-206ENST00000367253 DUS2Q9NX74 493 aaKnown RBP8.72□□□□□ -1.01
SYNE1-206ENST00000367253 SNX7Q9UNH6 387 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 NTSR2O95665 410 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 ALDH5A1P51649 535 aaPredicted RBP8.72□□□□□ -1.01
SYNE1-206ENST00000367253 SEC24CP53992 1094 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 IL2P60568 153 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 PTK7Q13308 1070 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 PKDCCQ504Y2 493 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 NAPEPLDQ6IQ20 393 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 C4orf22Q6V702 233 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 USP53Q70EK8 1073 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 ABRAQ8N0Z2 381 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 OXR1Q8N573 874 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 SMARCD1Q96GM5 515 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 TAAR1Q96RJ0 339 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 MAP3K14Q99558 947 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 OSBPL11Q9BXB4 747 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 REXO4Q9GZR2 422 aaKnown RBP8.72□□□□□ -1.01
SYNE1-206ENST00000367253 TNKS2Q9H2K2 1166 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 DDIT4Q9NX09 232 aa8.72□□□□□ -1.01
SYNE1-206ENST00000367253 NCKIPSDQ9NZQ3 722 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms