RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 ENPEPQ07075 957 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 GRB14Q14449 540 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 SRLQ86TD4 932 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 HORMAD1Q86X24 394 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 NKAPQ8N5F7 415 aaKnown RBP11.71□□□□□ -0.53
SYNE1-204ENST00000367248 HMGB4Q8WW32 186 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 INPP5DQ92835 1189 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 CERS2Q96G23 380 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 RWDD3Q9Y3V2 267 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 COL1A1P02452 1464 aaPredicted RBP11.71□□□□□ -0.53
SYNE1-204ENST00000367248 H3BQF6 201 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 TPST1O60507 370 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 SLC2A4P14672 509 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 PTPN2P17706 415 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 UBE3AQ05086 875 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 PPP1R15BQ5SWA1 713 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 PPP1R10Q96QC0 940 aaKnown RBP11.71□□□□□ -0.53
SYNE1-204ENST00000367248 ARHGAP39Q9C0H5 1083 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 TNKS2Q9H2K2 1166 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 CCDC134Q9H6E4 229 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 MID1IP1Q9NPA3 183 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 GTF2IRD1Q9UHL9 959 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 NOL4O94818 638 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 PDHA1P08559 390 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 GSTM1P09488 218 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 ELFN1P0C7U0 828 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 TSHRP16473 764 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 CYP2A13Q16696 494 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 CNSTQ6PJW8 725 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 UNC5AQ6ZN44 842 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 CHST9Q7L1S5 443 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 P2RY11Q96G91 374 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 ADNPQ9H2P0 1102 aa11.71□□□□□ -0.53
SYNE1-204ENST00000367248 APOBEC3GQ9HC16 384 aaKnown RBP11.71□□□□□ -0.53
SYNE1-204ENST00000367248 PTPN9P43378 593 aa11.71□□□□□ -0.54
SYNE1-204ENST00000367248 CNGA3Q16281 694 aa11.71□□□□□ -0.54
SYNE1-204ENST00000367248 ZNF555Q8NEP9 628 aa11.71□□□□□ -0.54
SYNE1-204ENST00000367248 EMID1Q96A84 441 aaPredicted RBP11.71□□□□□ -0.54
SYNE1-204ENST00000367248 OSBPL1AQ9BXW6 950 aa11.71□□□□□ -0.54
SYNE1-204ENST00000367248 ARL15Q9NXU5 204 aa11.71□□□□□ -0.54
SYNE1-204ENST00000367248 KIAA1522Q9P206 1035 aaPredicted RBP11.71□□□□□ -0.54
SYNE1-204ENST00000367248 PEAK1Q9H792 1746 aa11.71□□□□□ -0.54
SYNE1-204ENST00000367248 ADAMTS3O15072 1205 aa11.71□□□□□ -0.54
SYNE1-204ENST00000367248 PCCBP05166 539 aa11.71□□□□□ -0.54
SYNE1-204ENST00000367248 SPIRE1Q08AE8 756 aa11.71□□□□□ -0.54
SYNE1-204ENST00000367248 MED21Q13503 144 aa11.71□□□□□ -0.54
SYNE1-204ENST00000367248 CYP51A1Q16850 503 aa11.71□□□□□ -0.54
SYNE1-204ENST00000367248 MILR1Q7Z6M3 343 aa11.71□□□□□ -0.54
SYNE1-204ENST00000367248 HERVK_113Q902F9 699 aa11.71□□□□□ -0.54
SYNE1-204ENST00000367248 WRAP53Q9BUR4 548 aaKnown RBP11.71□□□□□ -0.54
SYNE1-204ENST00000367248 OSBPL2Q9H1P3 480 aa11.71□□□□□ -0.54
SYNE1-204ENST00000367248 ALKBH4Q9NXW9 302 aa11.71□□□□□ -0.54
SYNE1-204ENST00000367248 BAIAP3O94812 1187 aa11.71□□□□□ -0.54
SYNE1-204ENST00000367248 IMPDH2P12268 514 aa11.71□□□□□ -0.54
SYNE1-204ENST00000367248 DRG2P55039 364 aaKnown RBP11.71□□□□□ -0.54
SYNE1-204ENST00000367248 VARS2Q5ST30 1063 aaKnown RBP11.71□□□□□ -0.54
SYNE1-204ENST00000367248 PMF1Q6P1K2 205 aa11.71□□□□□ -0.54
SYNE1-204ENST00000367248 CSPG4P5Q96PW8 444 aa11.71□□□□□ -0.54
SYNE1-204ENST00000367248 COQ4Q9Y3A0 265 aa11.71□□□□□ -0.54
SYNE1-204ENST00000367248 A0A1W2PRU2 124 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 NFATC1O95644 943 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 FGF1P05230 155 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 TARSP26639 723 aaKnown RBP11.7□□□□□ -0.54
SYNE1-204ENST00000367248 GDI1P31150 447 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 TIE1P35590 1138 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 PRKAG1P54619 331 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 RPS7P62081 194 aaKnown RBP11.7□□□□□ -0.54
SYNE1-204ENST00000367248 GRSF1Q12849 480 aaKnown RBP eCLIP11.7□□□□□ -0.54
SYNE1-204ENST00000367248 MSLNQ13421 630 aaPredicted RBP11.7□□□□□ -0.54
SYNE1-204ENST00000367248 AFTPHQ6ULP2 937 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 DPY30Q9C005 99 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 EFR3BQ9Y2G0 817 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 CACNB4O00305 520 aaPredicted RBP11.7□□□□□ -0.54
SYNE1-204ENST00000367248 SLC25A14O95258 325 aaPredicted RBP11.7□□□□□ -0.54
SYNE1-204ENST00000367248 PIGRP01833 764 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 BNC2Q6ZN30 1099 aaPredicted RBP11.7□□□□□ -0.54
SYNE1-204ENST00000367248 TFAP2BQ92481 460 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 CIDEBQ9UHD4 219 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 H0Y858 1186 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 LRCH4O75427 683 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 TRPC1P48995 793 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 CLCN5P51795 746 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 CYLC2Q14093 348 aaPredicted RBP11.7□□□□□ -0.54
SYNE1-204ENST00000367248 ITIH4Q14624 930 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 NOMO1Q15155 1222 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 OLFML2BQ68BL8 750 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 FAAH2Q6GMR7 532 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 CYP20A1Q6UW02 462 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.7□□□□□ -0.54
SYNE1-204ENST00000367248 DIS3LQ8TF46 1054 aaKnown RBP11.7□□□□□ -0.54
SYNE1-204ENST00000367248 CNDP1Q96KN2 507 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 BBS4Q96RK4 519 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 FAM126AQ9BYI3 521 aaPredicted RBP11.7□□□□□ -0.54
SYNE1-204ENST00000367248 CYLDQ9NQC7 956 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 THAP1Q9NVV9 213 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 MYBPHLA2RUH7 354 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 YBEYP58557 167 aaPredicted RBP11.7□□□□□ -0.54
SYNE1-204ENST00000367248 CYTH1Q15438 398 aa11.7□□□□□ -0.54
SYNE1-204ENST00000367248 MTDHQ86UE4 582 aaKnown RBP11.7□□□□□ -0.54
SYNE1-204ENST00000367248 PCED1BQ96HM7 432 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms