RNA–Protein interactions for RNA: ENST00000366766.6

CDC42BPA-203, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,610 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-203ENST00000366766 EPB42P16452 691 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 CYP3A5P20815 502 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 SNRPD1P62314 119 aaKnown RBP12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 MYDGFQ969H8 173 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 ATP13A3Q9H7F0 1226 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 TTLL13PA6NNM8 815 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 ERVK-10P10266 1014 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 ROR2Q01974 943 aaKnown RBP12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 ACSM2AQ08AH3 577 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 CEP78Q5JTW2 689 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 STXBP5Q5T5C0 1151 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 ACSM2BQ68CK6 577 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 DCLRE1AQ6PJP8 1040 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 SLC4A11Q8NBS3 891 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 ANKRD63C9JTQ0 380 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 TRIM38O00635 465 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 SEC22BO75396 215 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 STAU1O95793 577 aaKnown RBP12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 IL5RAQ01344 420 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 TRIQKQ629K1 86 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 CCDC149Q6ZUS6 474 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 DLG4P78352 724 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 MON1BQ7L1V2 547 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 FIG4Q92562 907 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 EDEM1Q92611 657 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.16□□□□□ -0.466e-9■■■□□ 16.6
CDC42BPA-203ENST00000366766 INVSQ9Y283 1065 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 SHBGP04278 402 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 ANXA5P08758 320 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 CAPZA2P47755 286 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 HIRAP54198 1017 aaPredicted RBP12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 TCAIMQ8N3R3 496 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 NIFKQ9BYG3 293 aaKnown RBP12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 FANCEQ9HB96 536 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 ARMCX1Q9P291 453 aa12.16□□□□□ -0.46
CDC42BPA-203ENST00000366766 CASTOR2A6NHX0 329 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 ITGB5P18084 799 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 CHKAP35790 457 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 GRIA4P48058 902 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 OLR1P78380 273 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 MRPS6P82932 125 aaKnown RBP12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 FOXD4Q12950 439 aaPredicted RBP12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 PROSER1Q86XN7 944 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 IRGQQ8WZA9 623 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 P2RX7Q99572 595 aaKnown RBP12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 UBP1Q9NZI7 540 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 NFICP08651 508 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 NAGLUP54802 743 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 BHLHE22Q8NFJ8 381 aaPredicted RBP12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 DNAJB3Q8WWF6 145 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 NMD3Q96D46 503 aaKnown RBP12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 YME1L1Q96TA2 773 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 SMIM35A0A1B0GVV1 85 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 CLTBP09497 229 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 CRY1Q16526 586 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 SLC9A7Q96T83 725 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 LIMD1Q9UGP4 676 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 CRYBB1P53674 252 aaPredicted RBP12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 CYP1B1Q16678 543 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 ARHGAP22Q7Z5H3 698 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 LPCAT1Q8NF37 534 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 KBTBD8Q8NFY9 601 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 IRGMA1A4Y4 181 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 CBFA2T3O75081 653 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 RFTN2Q52LD8 501 aaPredicted RBP12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 MTX3Q5HYI7 312 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 IL27RAQ6UWB1 636 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 TBC1D21Q8IYX1 336 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 PHACTR4Q8IZ21 702 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 GJD3Q8N144 294 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 PRCCQ92733 491 aaPredicted RBP12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 ULK1O75385 1050 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 CNTN2Q02246 1040 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 VSTM1Q6UX27 236 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 FBXW8Q8N3Y1 598 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 ZNF526Q8TF50 670 aaPredicted RBP12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 QKIQ96PU8 341 aaKnown RBP eCLIP12.15□□□□□ -0.461e-11■■■■■ 59.5
CDC42BPA-203ENST00000366766 CDT1Q9H211 546 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 EPHB6O15197 1021 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 ASNA1O43681 348 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 CCNT2O60583 730 aaKnown RBP12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 MRPS5P82675 430 aaKnown RBP12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 GRIK3Q13003 919 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 CDC16Q13042 620 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 FAM171A1Q5VUB5 890 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 ANKRD23Q86SG2 305 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 STK32CQ86UX6 486 aa12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 REXO2Q9Y3B8 237 aaKnown RBP12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 ARIH1Q9Y4X5 557 aaPredicted RBP12.15□□□□□ -0.46
CDC42BPA-203ENST00000366766 A0A1W2PQ67 120 aa12.15□□□□□ -0.47
CDC42BPA-203ENST00000366766 CCDC166P0CW27 439 aa12.15□□□□□ -0.47
CDC42BPA-203ENST00000366766 GUCA1AP43080 201 aaPredicted RBP12.15□□□□□ -0.47
CDC42BPA-203ENST00000366766 PFKFB4Q16877 469 aa12.15□□□□□ -0.47
CDC42BPA-203ENST00000366766 ZNF605Q86T29 641 aa12.15□□□□□ -0.47
CDC42BPA-203ENST00000366766 MTMR14Q8NCE2 650 aa12.15□□□□□ -0.47
CDC42BPA-203ENST00000366766 CRYL1Q9Y2S2 319 aa12.15□□□□□ -0.47
CDC42BPA-203ENST00000366766 RCCD1A6NED2 376 aa12.15□□□□□ -0.47
CDC42BPA-203ENST00000366766 PRAMEF18Q5VWM3 479 aa12.15□□□□□ -0.47
CDC42BPA-203ENST00000366766 ZFP28Q8NHY6 868 aa12.15□□□□□ -0.47
CDC42BPA-203ENST00000366766 AP3S1Q92572 193 aa12.15□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms