RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 SUGP1Q8IWZ8 645 aaKnown RBP4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 OR4N2Q8NGD1 307 aa4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 RASSF8Q8NHQ8 419 aa4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 ARPC5LQ9BPX5 153 aa4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 NPFFR1Q9GZQ6 430 aa4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 C6orf106Q9H6K1 298 aaPredicted RBP4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 TTC12Q9H892 705 aaPredicted RBP4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 WDR6Q9NNW5 1121 aaKnown RBP4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 RASSF1Q9NS23 344 aa4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 CLDN16Q9Y5I7 305 aa4.31□□□□□ -1.72
RNU6-553P-201ENST00000364047 ANP32CO43423 234 aa4.3□□□□□ -1.72
RNU6-553P-201ENST00000364047 DHX16O60231 1041 aaKnown RBP4.3□□□□□ -1.72
RNU6-553P-201ENST00000364047 KCNJ13O60928 360 aa4.3□□□□□ -1.72
RNU6-553P-201ENST00000364047 ADAP00813 363 aa4.3□□□□□ -1.72
RNU6-553P-201ENST00000364047 SERPINC1P01008 464 aa4.3□□□□□ -1.72
RNU6-553P-201ENST00000364047 ART1P52961 327 aa4.3□□□□□ -1.72
RNU6-553P-201ENST00000364047 MYBPC2Q14324 1141 aa4.3□□□□□ -1.72
RNU6-553P-201ENST00000364047 HLFQ16534 295 aa4.3□□□□□ -1.72
RNU6-553P-201ENST00000364047 FBXO43Q4G163 708 aa4.3□□□□□ -1.72
RNU6-553P-201ENST00000364047 NAPEPLDQ6IQ20 393 aa4.3□□□□□ -1.72
RNU6-553P-201ENST00000364047 CREB3L2Q70SY1 520 aa4.3□□□□□ -1.72
RNU6-553P-201ENST00000364047 RBFAQ8N0V3 343 aa4.3□□□□□ -1.72
RNU6-553P-201ENST00000364047 DNAAF1Q8NEP3 725 aa4.3□□□□□ -1.72
RNU6-553P-201ENST00000364047 FAM216AQ8WUB2 273 aa4.3□□□□□ -1.72
RNU6-553P-201ENST00000364047 MVB12BQ9H7P6 319 aa4.3□□□□□ -1.72
RNU6-553P-201ENST00000364047 NOD2Q9HC29 1040 aa4.3□□□□□ -1.72
RNU6-553P-201ENST00000364047 SUFUQ9UMX1 484 aa4.3□□□□□ -1.72
RNU6-553P-201ENST00000364047 CNPY2Q9Y2B0 182 aa4.3□□□□□ -1.72
RNU6-553P-201ENST00000364047 GDAQ9Y2T3 454 aa4.3□□□□□ -1.72
RNU6-553P-201ENST00000364047 PCDHGB1Q9Y5G3 927 aa4.3□□□□□ -1.72
RNU6-553P-201ENST00000364047 IGHV4-28A0A0C4DH34 117 aa4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 SLC25A17O43808 307 aa4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 WEE2P0C1S8 567 aa4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 ITGB8P26012 769 aa4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 C21orf33P30042 268 aaPredicted RBP4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 DCTDP32321 178 aa4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 PAPOLAP51003 745 aaKnown RBP4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 ARSFP54793 590 aa4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 RRP1P56182 461 aaKnown RBP4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 SLC18A2Q05940 514 aa4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 CTTNQ14247 550 aaKnown RBP4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 GRAMD1BQ3KR37 738 aa4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 CLIP4Q8N3C7 705 aa4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 SPATA5Q8NB90 893 aa4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 LMO3Q8TAP4 145 aa4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 GPT2Q8TD30 523 aa4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 TMED6Q8WW62 240 aa4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 HSPH1Q92598 858 aa4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 TBC1D20Q96BZ9 403 aa4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 COG8Q96MW5 612 aa4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 STN1Q9H668 368 aaKnown RBP4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 ITM2CQ9NQX7 267 aa4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 ENTPD7Q9NQZ7 604 aa4.29□□□□□ -1.72
RNU6-553P-201ENST00000364047 LINC01553A4QN01 128 aa4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 CHL1O00533 1208 aa4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 PEX12O00623 359 aa4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 PEX14O75381 377 aa4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 SERPINI2O75830 405 aa4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 CTPS1P17812 591 aa4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 CLCN5P51795 746 aa4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 ARL4CP56559 192 aa4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 SEC61A1P61619 476 aaKnown RBP4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 TRAF3Q13114 568 aa4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 CAPSQ13938 189 aa4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 ANKRD1Q15327 319 aa4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 SLC18A3Q16572 532 aa4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 HERC6Q8IVU3 1022 aa4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 NKAPQ8N5F7 415 aaKnown RBP4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 NEXN-AS1Q8NBZ9 246 aa4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 RNF183Q96D59 192 aa4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 TXNDC15Q96J42 360 aa4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 LMLNQ96KR4 655 aa4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 MSTO1Q9BUK6 570 aa4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 IFT80Q9P2H3 777 aaPredicted RBP4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 MORC2Q9Y6X9 1032 aaPredicted RBP4.28□□□□□ -1.72
RNU6-553P-201ENST00000364047 BTBD18B2RXH4 712 aa4.27□□□□□ -1.73
RNU6-553P-201ENST00000364047 KLK10O43240 276 aa4.27□□□□□ -1.73
RNU6-553P-201ENST00000364047 ZBTB11O95625 1053 aaPredicted RBP4.27□□□□□ -1.73
RNU6-553P-201ENST00000364047 CNPP09543 421 aaKnown RBP4.27□□□□□ -1.73
RNU6-553P-201ENST00000364047 ZNF12P17014 697 aa4.27□□□□□ -1.73
RNU6-553P-201ENST00000364047 MXI1P50539 228 aa4.27□□□□□ -1.73
RNU6-553P-201ENST00000364047 GAS1P54826 345 aa4.27□□□□□ -1.73
RNU6-553P-201ENST00000364047 FAM27E3Q08E93 113 aa4.27□□□□□ -1.73
RNU6-553P-201ENST00000364047 KIF5AQ12840 1032 aa4.27□□□□□ -1.73
RNU6-553P-201ENST00000364047 LPIN1Q14693 890 aa4.27□□□□□ -1.73
RNU6-553P-201ENST00000364047 TYW3Q6IPR3 259 aaKnown RBP4.27□□□□□ -1.73
RNU6-553P-201ENST00000364047 CHD1LQ86WJ1 897 aa4.27□□□□□ -1.73
RNU6-553P-201ENST00000364047 MCPH1Q8NEM0 835 aa4.27□□□□□ -1.73
RNU6-553P-201ENST00000364047 SH3KBP1Q96B97 665 aa4.27□□□□□ -1.73
RNU6-553P-201ENST00000364047 RTP4Q96DX8 246 aa4.27□□□□□ -1.73
RNU6-553P-201ENST00000364047 FIZ1Q96SL8 496 aa4.27□□□□□ -1.73
RNU6-553P-201ENST00000364047 SLC25A33Q9BSK2 321 aa4.27□□□□□ -1.73
RNU6-553P-201ENST00000364047 TMEM51Q9NW97 253 aa4.27□□□□□ -1.73
RNU6-553P-201ENST00000364047 OCIAD1Q9NX40 245 aa4.27□□□□□ -1.73
RNU6-553P-201ENST00000364047 AGO1Q9UL18 857 aaKnown RBP4.27□□□□□ -1.73
RNU6-553P-201ENST00000364047 A0A1B0GVM2 712 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 VWA3AA6NCI4 1184 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 PPP1R3DO95685 299 aa4.26□□□□□ -1.73
RNU6-553P-201ENST00000364047 CHRM4P08173 479 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms