RNA–Protein interactions for RNA: ENST00000360718.5

SQSTM1-201, Transcript of sequestosome 1, humanhuman

TSL 1 (best) BASIC

Gene SQSTM1, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-201ENST00000360718 NRIP1P48552 1158 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 SGSHP51688 502 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 EPHA5P54756 1037 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 SLC18A2Q05940 514 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 TIGD7Q6NT04 549 aaPredicted RBP13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 TDHQ8IZJ6 230 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 UMODL1-AS1Q8N2C9 162 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 C12orf76Q8N812 135 aaPredicted RBP13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 LEMD2Q8NC56 503 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 PRICKLE1Q96MT3 831 aaPredicted RBP13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 TSGA13Q96PP4 275 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 SLC46A2Q9BY10 475 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 IQCGQ9H095 443 aaKnown RBP13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 LMAN2LQ9H0V9 348 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 SMG9Q9H0W8 520 aaKnown RBP13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 KLHL8Q9P2G9 620 aaPredicted RBP13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 SLC17A7Q9P2U7 560 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 AGO1Q9UL18 857 aaKnown RBP13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 CPQQ9Y646 472 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 MIA3Q5JRA6 1907 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 ARHGAP42A6NI28 874 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 KCNK1O00180 336 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 HAUS5O94927 633 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 CBX6O95503 412 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 LATS1O95835 1130 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 IL1BP01584 269 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 RHOP08100 348 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 DHRS4L1P0CG22 281 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 ZBTB16Q05516 673 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 TAF11Q15544 211 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 ARHGAP15Q53QZ3 475 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 ADGRF1Q5T601 910 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 TTC39BQ5VTQ0 682 aaPredicted RBP13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 PID1Q7Z2X4 250 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 CFAP52Q8N1V2 620 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 TEX9Q8N6V9 391 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 ENDOVQ8N8Q3 282 aaKnown RBP13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 NSL1Q96IY1 281 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 NUDCD1Q96RS6 583 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 SLC39A8Q9C0K1 460 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 ZDHHC7Q9NXF8 308 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 DCTN4Q9UJW0 460 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 TRHDEQ9UKU6 1024 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 TEX264Q9Y6I9 313 aa13.37□□□□□ -0.27
SQSTM1-201ENST00000360718 TCRBV9S1A1TA0A576 114 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 LIN7AO14910 233 aaPredicted RBP13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 DNAJC6O75061 913 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 KRT37O76014 449 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 APRTP07741 180 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 GNAZP19086 355 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 DDX6P26196 483 aaKnown RBP eCLIP13.36□□□□□ -0.271e-15■□□□□ 9.2
SQSTM1-201ENST00000360718 OR1E1P30953 314 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 BMP8BP34820 402 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 MAPKAPK2P49137 400 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 SARNPP82979 210 aaKnown RBP13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 WASHC5Q12768 1159 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 KCNC3Q14003 757 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 KCNJ11Q14654 390 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 TEAD2Q15562 447 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 DUSP6Q16828 381 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 SYCP2LQ5T4T6 812 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 GRASPQ7Z6J2 395 aaPredicted RBP13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 SLC26A11Q86WA9 606 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 ZNF570Q96NI8 536 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 KLF6Q99612 283 aaPredicted RBP13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 HEY2Q9UBP5 337 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 A0A0G2JND7 137 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 CCDC195A0A1B0GUA6 201 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 PEX11AO75192 247 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 NEBLO76041 1014 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 GSTA2P09210 222 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 PTPN3P26045 913 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 NUMBP49757 651 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 NEK3P51956 506 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 RPS24P62847 133 aaKnown RBP13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 SLC7A9P82251 487 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 ANO4Q32M45 955 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 KBTBD12Q3ZCT8 623 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 C5orf22Q49AR2 442 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 FAXCQ5TGI0 409 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 AFMIDQ63HM1 303 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 ITPRIPL1Q6GPH6 555 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 ZNF354CQ86Y25 554 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 ZNF567Q8N184 647 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 TTC16Q8NEE8 873 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 RFWD2Q8NHY2 731 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 RIN3Q8TB24 985 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 ZNF419Q96HQ0 510 aaPredicted RBP13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 BTBD10Q9BSF8 475 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 DCLRE1BQ9H816 532 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 CCL26Q9Y258 94 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 ZNF510Q9Y2H8 683 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 LRRC42Q9Y546 428 aa13.36□□□□□ -0.27
SQSTM1-201ENST00000360718 UNC80Q8N2C7 3258 aa13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 TYW5A2RUC4 315 aaKnown RBP13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 COPEO14579 308 aa13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 KLF11O14901 512 aa13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 RAMP2O60895 175 aa13.35□□□□□ -0.27
SQSTM1-201ENST00000360718 FAM155BO75949 473 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms