RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 NOVA2Q9UNW9 492 aaKnown RBP21.28■■□□□ 1
MAP1LC3A-201ENST00000360668 MAGEB16A2A368 324 aa21.27■■□□□ 1
MAP1LC3A-201ENST00000360668 PENKP01210 267 aaPredicted RBP21.27■■□□□ 1
MAP1LC3A-201ENST00000360668 FSHRP23945 695 aa21.27■■□□□ 1
MAP1LC3A-201ENST00000360668 PRKCHP24723 683 aa21.27■■□□□ 1
MAP1LC3A-201ENST00000360668 ATP5DP30049 168 aa21.27■■□□□ 1
MAP1LC3A-201ENST00000360668 SLC12A1Q13621 1099 aa21.27■■□□□ 1
MAP1LC3A-201ENST00000360668 GLIPR1L2Q4G1C9 344 aa21.27■■□□□ 1
MAP1LC3A-201ENST00000360668 INO80DQ53TQ3 878 aaPredicted RBP21.27■■□□□ 1
MAP1LC3A-201ENST00000360668 TCEAL5Q5H9L2 206 aa21.27■■□□□ 1
MAP1LC3A-201ENST00000360668 RANBP10Q6VN20 620 aa21.27■■□□□ 1
MAP1LC3A-201ENST00000360668 ZNF557Q8N988 423 aaPredicted RBP21.27■■□□□ 1
MAP1LC3A-201ENST00000360668 SEMA3CQ99985 751 aa21.27■■□□□ 1
MAP1LC3A-201ENST00000360668 APOL2Q9BQE5 337 aa21.27■■□□□ 1
MAP1LC3A-201ENST00000360668 CAPS2Q9BXY5 557 aa21.27■■□□□ 1
MAP1LC3A-201ENST00000360668 PLK2Q9NYY3 685 aa21.27■■□□□ 1
MAP1LC3A-201ENST00000360668 MUSKO15146 869 aa21.27■□□□□ 0.99
MAP1LC3A-201ENST00000360668 SNAP91O60641 907 aa21.27■□□□□ 0.99
MAP1LC3A-201ENST00000360668 CES1P23141 567 aa21.27■□□□□ 0.99
MAP1LC3A-201ENST00000360668 NUMBP49757 651 aa21.27■□□□□ 0.99
MAP1LC3A-201ENST00000360668 PLK1P53350 603 aa21.27■□□□□ 0.99
MAP1LC3A-201ENST00000360668 CRADDP78560 199 aa21.27■□□□□ 0.99
MAP1LC3A-201ENST00000360668 LMAN2Q12907 356 aa21.27■□□□□ 0.99
MAP1LC3A-201ENST00000360668 CYTH1Q15438 398 aa21.27■□□□□ 0.99
MAP1LC3A-201ENST00000360668 ARMC3Q5W041 872 aa21.27■□□□□ 0.99
MAP1LC3A-201ENST00000360668 DENND5AQ6IQ26 1287 aa21.27■□□□□ 0.99
MAP1LC3A-201ENST00000360668 ANKRD54Q6NXT1 300 aa21.27■□□□□ 0.99
MAP1LC3A-201ENST00000360668 TMEM25Q86YD3 366 aa21.27■□□□□ 0.99
MAP1LC3A-201ENST00000360668 NPAS3Q8IXF0 933 aa21.27■□□□□ 0.99
MAP1LC3A-201ENST00000360668 IRF7Q92985 503 aa21.27■□□□□ 0.99
MAP1LC3A-201ENST00000360668 DHRS4Q9BTZ2 278 aa21.27■□□□□ 0.99
MAP1LC3A-201ENST00000360668 C2orf49Q9BVC5 232 aaPredicted RBP21.27■□□□□ 0.99
MAP1LC3A-201ENST00000360668 CNOT10Q9H9A5 744 aaKnown RBP21.27■□□□□ 0.99
MAP1LC3A-201ENST00000360668 ARNT2Q9HBZ2 717 aa21.27■□□□□ 0.99
MAP1LC3A-201ENST00000360668 SPHK2Q9NRA0 654 aa21.27■□□□□ 0.99
MAP1LC3A-201ENST00000360668 VPS51Q9UID3 782 aa21.27■□□□□ 0.99
MAP1LC3A-201ENST00000360668 ACTL7AQ9Y615 435 aa21.27■□□□□ 0.99
MAP1LC3A-201ENST00000360668 CXorf51AA0A1B0GTR3 108 aa21.26■□□□□ 0.99
MAP1LC3A-201ENST00000360668 SRRM3A6NNA2 597 aaPredicted RBP21.26■□□□□ 0.99
MAP1LC3A-201ENST00000360668 POC1B-GALNT4F8VUJ3 575 aa21.26■□□□□ 0.99
MAP1LC3A-201ENST00000360668 ALDH1A2O94788 518 aa21.26■□□□□ 0.99
MAP1LC3A-201ENST00000360668 CD160O95971 181 aa21.26■□□□□ 0.99
MAP1LC3A-201ENST00000360668 POLBP06746 335 aa21.26■□□□□ 0.99
MAP1LC3A-201ENST00000360668 MAGOHP61326 146 aaKnown RBP21.26■□□□□ 0.99
MAP1LC3A-201ENST00000360668 PPP2R2AP63151 447 aa21.26■□□□□ 0.99
MAP1LC3A-201ENST00000360668 CERCAMQ5T4B2 595 aa21.26■□□□□ 0.99
MAP1LC3A-201ENST00000360668 ACDQ96AP0 544 aa21.26■□□□□ 0.99
MAP1LC3A-201ENST00000360668 LMLNQ96KR4 655 aa21.26■□□□□ 0.99
MAP1LC3A-201ENST00000360668 MARK1Q9P0L2 795 aa21.26■□□□□ 0.99
MAP1LC3A-201ENST00000360668 PSMC3IPQ9P2W1 217 aaPredicted RBP21.26■□□□□ 0.99
MAP1LC3A-201ENST00000360668 CLEC4EQ9ULY5 219 aa21.26■□□□□ 0.99
MAP1LC3A-201ENST00000360668 C1QAP02745 245 aa21.25■□□□□ 0.99
MAP1LC3A-201ENST00000360668 FOSL2P15408 326 aa21.25■□□□□ 0.99
MAP1LC3A-201ENST00000360668 FRG1Q14331 258 aaKnown RBP21.25■□□□□ 0.99
MAP1LC3A-201ENST00000360668 KBTBD12Q3ZCT8 623 aa21.25■□□□□ 0.99
MAP1LC3A-201ENST00000360668 SPANXN3Q5MJ09 141 aa21.25■□□□□ 0.99
MAP1LC3A-201ENST00000360668 RETSATQ6NUM9 610 aa21.25■□□□□ 0.99
MAP1LC3A-201ENST00000360668 SYCE2Q6PIF2 218 aa21.25■□□□□ 0.99
MAP1LC3A-201ENST00000360668 LINC00597Q9H2U6 94 aa21.25■□□□□ 0.99
MAP1LC3A-201ENST00000360668 MOCS1Q9NZB8 636 aa21.25■□□□□ 0.99
MAP1LC3A-201ENST00000360668 GDE1Q9NZC3 331 aa21.25■□□□□ 0.99
MAP1LC3A-201ENST00000360668 CTNNAL1Q9UBT7 734 aa21.25■□□□□ 0.99
MAP1LC3A-201ENST00000360668 SOX13Q9UN79 622 aa21.25■□□□□ 0.99
MAP1LC3A-201ENST00000360668 FAM237BA0A1B0GVD1 139 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 LINC01565O15544 149 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 USP1O94782 785 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 TMCC1O94876 653 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 SERPINF2P08697 491 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 HOXB8P17481 243 aaPredicted RBP21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 CR2P20023 1033 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 MSH2P43246 934 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 IHHQ14623 411 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 CRYMQ14894 314 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 EFTUD2Q15029 972 aaKnown RBP eCLIP21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 PCSK7Q16549 785 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 SKIDA1Q1XH10 827 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 PLEKHG6Q3KR16 790 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 ZNF449Q6P9G9 518 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 ADGRD1Q6QNK2 874 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 TMEM135Q86UB9 458 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 ADGRG2Q8IZP9 1017 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 APCDD1Q8J025 514 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 FGF13Q92913 245 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 TTC17Q96AE7 1141 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 ASB16Q96NS5 453 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 PAFAH2Q99487 392 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 TRIM56Q9BRZ2 755 aaKnown RBP21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 BBS2Q9BXC9 721 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 LMCD1Q9NZU5 365 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 WNT6Q9Y6F9 365 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 MIA3Q5JRA6 1907 aa21.24■□□□□ 0.99
MAP1LC3A-201ENST00000360668 LOC285095A0A1B0GVY8 99 aa21.23■□□□□ 0.99
MAP1LC3A-201ENST00000360668 FAM159BA6NKW6 160 aa21.23■□□□□ 0.99
MAP1LC3A-201ENST00000360668 ATP9BO43861 1147 aa21.23■□□□□ 0.99
MAP1LC3A-201ENST00000360668 EPOP01588 193 aa21.23■□□□□ 0.99
MAP1LC3A-201ENST00000360668 TPH1P17752 444 aa21.23■□□□□ 0.99
MAP1LC3A-201ENST00000360668 CD70P32970 193 aa21.23■□□□□ 0.99
MAP1LC3A-201ENST00000360668 NSUN2Q08J23 767 aaKnown RBP eCLIP21.23■□□□□ 0.99
MAP1LC3A-201ENST00000360668 NR1H3Q13133 447 aa21.23■□□□□ 0.99
MAP1LC3A-201ENST00000360668 FAM78AQ5JUQ0 283 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms