RNA–Protein interactions for RNA: ENST00000359895.6

PDLIM7-203, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-203ENST00000359895 ESRP1Q6NXG1 681 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 KLHDC10Q6PID8 442 aa18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 SLC39A5Q6ZMH5 540 aa18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 ZCCHC23Q6ZST2 131 aa18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 C10orf107Q8IVU9 208 aa18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 PIWIL2Q8TC59 973 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 CALML6Q8TD86 181 aa18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 NSL1Q96IY1 281 aa18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 ZNF599Q96NL3 588 aa18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 TOX2Q96NM4 488 aa18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 AFF4Q9UHB7 1163 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 SLC39A10Q9ULF5 831 aa18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 MRPL42Q9Y6G3 142 aaKnown RBP18.52■□□□□ 0.56
PDLIM7-203ENST00000359895 ACSL4O60488 711 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 CCDC22O60826 627 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 PAPSS2O95340 614 aaPredicted RBP18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 CD86P42081 329 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 SLC11A2P49281 568 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 PRKAA2P54646 552 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 SEPT6Q14141 434 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 LBRQ14739 615 aaKnown RBP18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 PCSK7Q16549 785 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 TMCO4Q5TGY1 634 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 KIAA1841Q6NSI8 718 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 CNKSR3Q6P9H4 555 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 KIAA0408Q6ZU52 694 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 DEFB128Q7Z7B8 93 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 LGI2Q8N0V4 545 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 TADA1Q96BN2 335 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 PLD4Q96BZ4 506 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 SLC7A6OSQ96CW6 309 aaPredicted RBP18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 IGSF21Q96ID5 467 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 PPP1R12CQ9BZL4 782 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 RNF208Q9H0X6 261 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 CWH43Q9H720 699 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 CCDC78A2IDD5 438 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 TMEM114B3SHH9 223 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 GOLGA8TH3BQL2 631 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 FCHO1O14526 889 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 CHUKO15111 745 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 ADAM12O43184 909 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 PRAMEF11O60813 436 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 CBX6O95503 412 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 AHSGP02765 367 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 MMP2P08253 660 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 CCL5P13501 91 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 HARS2P49590 506 aaKnown RBP18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 AQP5P55064 265 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 ILF2Q12905 390 aaKnown RBP18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 SLC12A1Q13621 1099 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 LAMB3Q13751 1172 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 USP10Q14694 798 aaKnown RBP18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 RABGAP1LQ5R372 815 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 HECTD3Q5T447 861 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 TPGS2Q68CL5 300 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 RAPH1Q70E73 1250 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 PLD6Q8N2A8 252 aaKnown RBP18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 C2CD4AQ8NCU7 369 aaPredicted RBP18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 ZNF512Q96ME7 567 aaPredicted RBP18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 KLHL5Q96PQ7 755 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 C20orf27Q9GZN8 174 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 NACA2Q9H009 215 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 MAGEH1Q9H213 219 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 CAB39LQ9H9S4 337 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 NMRAL1Q9HBL8 299 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 LTBP2Q14767 1821 aa18.51■□□□□ 0.55
PDLIM7-203ENST00000359895 BRCA2P51587 3418 aa18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 UPP2O95045 317 aa18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 CALB2P22676 271 aa18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 ARNTP27540 789 aa18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 CRABP2P29373 138 aa18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 SLC8A1P32418 973 aa18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 ATN1P54259 1190 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 ABCE1P61221 599 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 DSC2Q02487 901 aa18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 BTG3Q14201 252 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 TBCCQ15814 346 aa18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 CNGA3Q16281 694 aa18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 TSTD2Q5T7W7 516 aa18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 FBXO46Q6PJ61 603 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 BBS5Q8N3I7 341 aa18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 SLC25A41Q8N5S1 370 aa18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 OR6Y1Q8NGX8 325 aa18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 PTCD3Q96EY7 689 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 POLR1EQ9GZS1 481 aaKnown RBP18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 ATXN3LQ9H3M9 355 aa18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 TLE6Q9H808 572 aa18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 ZNF395Q9H8N7 513 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 NOD2Q9HC29 1040 aa18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 FBXO6Q9NRD1 293 aaPredicted RBP18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 BAIAP2L1Q9UHR4 511 aa18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 SORCS3Q9UPU3 1222 aa18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 DNAJC16Q9Y2G8 782 aa18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 STK38LQ9Y2H1 464 aa18.5■□□□□ 0.55
PDLIM7-203ENST00000359895 ANAPC1Q9H1A4 1944 aa18.49■□□□□ 0.55
PDLIM7-203ENST00000359895 ZNF840PA6NDX5 716 aa18.49■□□□□ 0.55
PDLIM7-203ENST00000359895 KITP10721 976 aa18.49■□□□□ 0.55
PDLIM7-203ENST00000359895 CHRNA4P43681 627 aa18.49■□□□□ 0.55
PDLIM7-203ENST00000359895 ABCG1P45844 678 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms