RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 OVCA2Q8WZ82 227 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 IGSF8Q969P0 613 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 PTCD3Q96EY7 689 aaKnown RBP15.09■□□□□ 0.01
GABPB1-202ENST00000359031 ZNF778Q96MU6 729 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 TSNARE1Q96NA8 513 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 RPRD1AQ96P16 312 aaPredicted RBP15.09■□□□□ 0.01
GABPB1-202ENST00000359031 RETREG1Q9H6L5 497 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 TLE6Q9H808 572 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 NT5MQ9NPB1 228 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 FBXO6Q9NRD1 293 aaPredicted RBP15.09■□□□□ 0.01
GABPB1-202ENST00000359031 MTRRQ9UBK8 725 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 BAIAP2L1Q9UHR4 511 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 OGDHLQ9ULD0 1010 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 STK38LQ9Y2H1 464 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 DNAH12Q6ZR08 3092 aa15.09■□□□□ 0.01
GABPB1-202ENST00000359031 HEATR9A2RTY3 570 aa15.08■□□□□ 0
GABPB1-202ENST00000359031 C2P06681 752 aa15.08■□□□□ 0
GABPB1-202ENST00000359031 RALBP11234 206 aa15.08■□□□□ 0
GABPB1-202ENST00000359031 ATF6P18850 670 aa15.08■□□□□ 0
GABPB1-202ENST00000359031 CALB2P22676 271 aa15.08■□□□□ 0
GABPB1-202ENST00000359031 ARCN1P48444 511 aaKnown RBP15.08■□□□□ 0
GABPB1-202ENST00000359031 MNAT1P51948 309 aa15.08■□□□□ 0
GABPB1-202ENST00000359031 AQP5P55064 265 aa15.08■□□□□ 0
GABPB1-202ENST00000359031 GRM3Q14832 879 aa15.08■□□□□ 0
GABPB1-202ENST00000359031 TBCCQ15814 346 aa15.08■□□□□ 0
GABPB1-202ENST00000359031 SLC8B1Q6J4K2 584 aa15.08■□□□□ 0
GABPB1-202ENST00000359031 TMEM173Q86WV6 379 aaPredicted RBP15.08■□□□□ 0
GABPB1-202ENST00000359031 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.08■□□□□ 0
GABPB1-202ENST00000359031 GABPB2Q8TAK5 448 aaPredicted RBP15.08■□□□□ 0
GABPB1-202ENST00000359031 BCL7CQ8WUZ0 217 aaPredicted RBP15.08■□□□□ 0
GABPB1-202ENST00000359031 UTP4Q969X6 686 aaKnown RBP15.08■□□□□ 0
GABPB1-202ENST00000359031 NSL1Q96IY1 281 aa15.08■□□□□ 0
GABPB1-202ENST00000359031 C20orf27Q9GZN8 174 aa15.08■□□□□ 0
GABPB1-202ENST00000359031 RPL26L1Q9UNX3 145 aaKnown RBP15.08■□□□□ 0
GABPB1-202ENST00000359031 BACE2Q9Y5Z0 518 aa15.08■□□□□ 0
GABPB1-202ENST00000359031 CDY1Q9Y6F8 540 aa15.08■□□□□ 0
GABPB1-202ENST00000359031 TET1Q8NFU7 2136 aa15.08■□□□□ 0
GABPB1-202ENST00000359031 TMEM114B3SHH9 223 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 NT5C1B-RDH14C9J2C7 533 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 J3KR12 359 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 PQBP1O60828 265 aaKnown RBP15.07■□□□□ 0
GABPB1-202ENST00000359031 EFEMP2O95967 443 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 HMBSP08397 361 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 COL6A2P12110 1019 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 TACR2P21452 398 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 ARNTP27540 789 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 HARS2P49590 506 aaKnown RBP15.07■□□□□ 0
GABPB1-202ENST00000359031 PRKAA2P54646 552 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 ABCE1P61221 599 aaKnown RBP15.07■□□□□ 0
GABPB1-202ENST00000359031 THOC5Q13769 683 aaKnown RBP15.07■□□□□ 0
GABPB1-202ENST00000359031 POLD3Q15054 466 aaPredicted RBP15.07■□□□□ 0
GABPB1-202ENST00000359031 C5orf22Q49AR2 442 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 ESRP1Q6NXG1 681 aaKnown RBP15.07■□□□□ 0
GABPB1-202ENST00000359031 PRSS55Q6UWB4 352 aaPredicted RBP15.07■□□□□ 0
GABPB1-202ENST00000359031 KIAA0408Q6ZU52 694 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 PLD6Q8N2A8 252 aaKnown RBP15.07■□□□□ 0
GABPB1-202ENST00000359031 FBXO22Q8NEZ5 403 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 OR6Y1Q8NGX8 325 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 TADA1Q96BN2 335 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 PABPC5Q96DU9 382 aaKnown RBP15.07■□□□□ 0
GABPB1-202ENST00000359031 TBC1D10AQ9BXI6 508 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 COL25A1Q9BXS0 654 aaPredicted RBP15.07■□□□□ 0
GABPB1-202ENST00000359031 NMUR2Q9GZQ4 415 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 ZNF395Q9H8N7 513 aaPredicted RBP15.07■□□□□ 0
GABPB1-202ENST00000359031 CAB39LQ9H9S4 337 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 ARL8BQ9NVJ2 186 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 MARCOQ9UEW3 520 aaPredicted RBP15.07■□□□□ 0
GABPB1-202ENST00000359031 TLK1Q9UKI8 766 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 SLC39A10Q9ULF5 831 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 DNAJC16Q9Y2G8 782 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 MRPL42Q9Y6G3 142 aaKnown RBP15.07■□□□□ 0
GABPB1-202ENST00000359031 CHD5Q8TDI0 1954 aa15.07■□□□□ 0
GABPB1-202ENST00000359031 CCDC78A2IDD5 438 aa15.06■□□□□ 0
GABPB1-202ENST00000359031 C2orf71A6NGG8 1288 aa15.06■□□□□ 0
GABPB1-202ENST00000359031 F5H5T6 163 aa15.06■□□□□ 0
GABPB1-202ENST00000359031 GOLGA8TH3BQL2 631 aa15.06■□□□□ 0
GABPB1-202ENST00000359031 VAPBO95292 243 aa15.06■□□□□ 0
GABPB1-202ENST00000359031 PAPSS2O95340 614 aaPredicted RBP15.06■□□□□ 0
GABPB1-202ENST00000359031 ALOX15P16050 662 aaPredicted RBP15.06■□□□□ 0
GABPB1-202ENST00000359031 PBX3P40426 434 aa15.06■□□□□ 0
GABPB1-202ENST00000359031 ABCG1P45844 678 aa15.06■□□□□ 0
GABPB1-202ENST00000359031 TUFMP49411 452 aaKnown RBP15.06■□□□□ 0
GABPB1-202ENST00000359031 SERPINH1P50454 418 aaKnown RBP15.06■□□□□ 0
GABPB1-202ENST00000359031 IRF9Q00978 393 aa15.06■□□□□ 0
GABPB1-202ENST00000359031 SLC10A7Q0GE19 358 aa15.06■□□□□ 0
GABPB1-202ENST00000359031 SERINC3Q13530 473 aa15.06■□□□□ 0
GABPB1-202ENST00000359031 SEPT6Q14141 434 aa15.06■□□□□ 0
GABPB1-202ENST00000359031 USP10Q14694 798 aaKnown RBP15.06■□□□□ 0
GABPB1-202ENST00000359031 PCSK7Q16549 785 aa15.06■□□□□ 0
GABPB1-202ENST00000359031 USP41Q3LFD5 358 aa15.06■□□□□ 0
GABPB1-202ENST00000359031 HSF5Q4G112 596 aaPredicted RBP15.06■□□□□ 0
GABPB1-202ENST00000359031 TMCO4Q5TGY1 634 aa15.06■□□□□ 0
GABPB1-202ENST00000359031 SNX30Q5VWJ9 437 aa15.06■□□□□ 0
GABPB1-202ENST00000359031 NADSYN1Q6IA69 706 aa15.06■□□□□ 0
GABPB1-202ENST00000359031 ALYREFQ86V81 257 aaKnown RBP15.06■□□□□ 0
GABPB1-202ENST00000359031 ZNF354CQ86Y25 554 aa15.06■□□□□ 0
GABPB1-202ENST00000359031 RNF168Q8IYW5 571 aaPredicted RBP15.06■□□□□ 0
GABPB1-202ENST00000359031 C2CD4AQ8NCU7 369 aaPredicted RBP15.06■□□□□ 0
GABPB1-202ENST00000359031 CALML6Q8TD86 181 aa15.06■□□□□ 0
GABPB1-202ENST00000359031 GIPC2Q8TF65 315 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms