RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 MUTP22033 750 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 IDH3AP50213 366 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 ATN1P54259 1190 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-203ENST00000358544 LRRC74AQ0VAA2 488 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 UBR7Q8N806 425 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 SIK2Q9H0K1 926 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 GH2P01242 217 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 GSTM1P09488 218 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 GSTT2P0CG29 244 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 GSTT2BP0CG30 244 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 MGAT1P26572 445 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 TLR1Q15399 786 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 TAS1R2Q8TE23 839 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 ISOC1Q96CN7 298 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 MNTQ99583 582 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 TBCDQ9BTW9 1192 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 ZNF696Q9H7X3 374 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 IGSF9BQ9UPX0 1349 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 TET3O43151 1660 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 AGRPO00253 132 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 AVILO75366 819 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 FYNP06241 537 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 ATP5F1P24539 256 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-203ENST00000358544 PPATQ06203 517 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 PCSK7Q16549 785 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 XKRXQ6PP77 449 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 CATSPER4Q7RTX7 472 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 PALB2Q86YC2 1186 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 SPIRE2Q8WWL2 714 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 ASB12Q8WXK4 309 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 ERGIC3Q9Y282 383 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 SLC9A8Q9Y2E8 581 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 FREM1Q5H8C1 2179 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 BCAS2O75934 225 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-203ENST00000358544 CRYZL1O95825 349 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 CREB1P16220 341 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 PSMA3P25788 255 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 PSMD5Q16401 504 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 MYLK3Q32MK0 819 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 EMC10Q5UCC4 262 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 GARNL3Q5VVW2 1013 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 FNDC5Q8NAU1 212 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 LSM14AQ8ND56 463 aaKnown RBP6.13□□□□□ -1.43
VPS13B-203ENST00000358544 RDH11Q8TC12 318 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 TRIM62Q9BVG3 475 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 GTPBP2Q9BX10 602 aaKnown RBP6.13□□□□□ -1.43
VPS13B-203ENST00000358544 SYNCRIPO60506 623 aaKnown RBP6.13□□□□□ -1.43
VPS13B-203ENST00000358544 EPHA3P29320 983 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 SLC18A2Q05940 514 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 SLC9A5Q14940 896 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 SPANXN3Q5MJ09 141 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 SVOPLQ8N434 492 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 SAMD3Q8N6K7 520 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 COLGALT1Q8NBJ5 622 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 LPGAT1Q92604 370 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 CIB1Q99828 191 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 MRPL9Q9BYD2 267 aaKnown RBP6.13□□□□□ -1.43
VPS13B-203ENST00000358544 FAM49AQ9H0Q0 323 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-203ENST00000358544 SYNDIG1LA6NDD5 238 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 H3BMM5 538 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 GLDCP23378 1020 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 GALNT12Q8IXK2 581 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 TMEM132CQ8N3T6 1108 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 HDAC2Q92769 488 aaKnown RBP6.13□□□□□ -1.43
VPS13B-203ENST00000358544 TADA1Q96BN2 335 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 TEKT5Q96M29 485 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 JPH1Q9HDC5 661 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-203ENST00000358544 DPP3Q9NY33 737 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 ROBO2Q9HCK4 1378 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 ZSCAN5BA6NJL1 495 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 SNAP23O00161 211 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 AURKAO14965 403 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 AXIN1O15169 862 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 PDPK1O15530 556 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 MTRF1O75570 445 aaKnown RBP6.13□□□□□ -1.43
VPS13B-203ENST00000358544 ERVK-10P10266 1014 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 CHI3L1P36222 383 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-203ENST00000358544 ZNF267Q14586 743 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-203ENST00000358544 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-203ENST00000358544 DPY30Q9C005 99 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 SLC22A4Q9H015 551 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 TBX20Q9UMR3 447 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 TK2O00142 265 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 SLC22A2O15244 555 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 MLNP12872 115 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 SLC16A1P53985 500 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 EFR3AQ14156 821 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 OR56A4Q8NGH8 313 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 TOP1MTQ969P6 601 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 S100PBPQ96BU1 408 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 SERAC1Q96JX3 654 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 MTMR4Q9NYA4 1195 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 COG5Q9UP83 839 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 SAMHD1Q9Y3Z3 626 aaKnown RBP6.13□□□□□ -1.43
VPS13B-203ENST00000358544 IQGAP3Q86VI3 1631 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 ABCA9Q8IUA7 1624 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 ARHGEF33A8MVX0 844 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 AIREO43918 545 aa6.13□□□□□ -1.43
VPS13B-203ENST00000358544 MOCS2O96007 188 aaPredicted RBP6.13□□□□□ -1.43
VPS13B-203ENST00000358544 UNC5AQ6ZN44 842 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms