RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 GRM6O15303 877 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 TRIP4Q15650 581 aaPredicted RBP14.06□□□□□ -0.16
LSS-201ENST00000356396 SLC5A9Q2M3M2 681 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 PDZD4Q76G19 769 aaPredicted RBP14.06□□□□□ -0.16
LSS-201ENST00000356396 TBC1D1Q86TI0 1168 aaPredicted RBP14.06□□□□□ -0.16
LSS-201ENST00000356396 ALYREFQ86V81 257 aaKnown RBP14.06□□□□□ -0.16
LSS-201ENST00000356396 RELL1Q8IUW5 271 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 ATP6V0D2Q8N8Y2 350 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.06□□□□□ -0.16
LSS-201ENST00000356396 DPF3Q92784 378 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 EBF4Q9BQW3 602 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 IGFLR1Q9H665 355 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 HAUS2Q9NVX0 235 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 MOCS1Q9NZB8 636 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 CFAP97Q9P2B7 532 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 IQANK1A0A1B0GTG1 560 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 ACSL4O60488 711 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 MMP2P08253 660 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 FDFT1P37268 417 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 IL9RQ01113 521 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 USP4Q13107 963 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 ZNF235Q14590 738 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 BRMS1LQ5PSV4 323 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 TTC39BQ5VTQ0 682 aaPredicted RBP14.06□□□□□ -0.16
LSS-201ENST00000356396 BZW1Q7L1Q6 419 aaKnown RBP14.06□□□□□ -0.16
LSS-201ENST00000356396 ARID3BQ8IVW6 561 aaPredicted RBP14.06□□□□□ -0.16
LSS-201ENST00000356396 SFTPA1Q8IWL2 248 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 CCDC197Q8NCU1 140 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 SHKBP1Q8TBC3 707 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 KCTD4Q8WVF5 259 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 POF1BQ8WVV4 589 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 HDAC10Q969S8 669 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 ESAMQ96AP7 390 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 SLC45A3Q96JT2 553 aa14.06□□□□□ -0.16
LSS-201ENST00000356396 DNAJC1Q96KC8 554 aaKnown RBP14.06□□□□□ -0.16
LSS-201ENST00000356396 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.05□□□□□ -0.16
LSS-201ENST00000356396 FAM159BA6NKW6 160 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 A6NNZ2 444 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 PIGNO95427 931 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 ITGB6P18564 788 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 TPSB2P20231 275 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 SERPINB4P48594 390 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 BST1Q10588 318 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 TPSAB1Q15661 275 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 FBXO46Q6PJ61 603 aaPredicted RBP14.05□□□□□ -0.16
LSS-201ENST00000356396 ADAMTS19Q8TE59 1207 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 STMN4Q9H169 189 aaPredicted RBP14.05□□□□□ -0.16
LSS-201ENST00000356396 XAB2Q9HCS7 855 aaKnown RBP14.05□□□□□ -0.16
LSS-201ENST00000356396 IGSF9Q9P2J2 1179 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 VPS28Q9UK41 221 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 PACSIN3Q9UKS6 424 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 KRT87PA6NCN2 255 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 IQCF5A8MTL0 148 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 HACD1B0YJ81 288 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 H0YHG0 523 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 SLC1A2P43004 574 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 SARNPP82979 210 aaKnown RBP14.05□□□□□ -0.16
LSS-201ENST00000356396 SIRPB2Q5JXA9 342 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 TEDDM1Q5T9Z0 273 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 SH2D5Q6ZV89 423 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 SPATA21Q7Z572 469 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 C10orf107Q8IVU9 208 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 ZNF276Q8N554 614 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 EFCAB3Q8N7B9 438 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 DCBLD1Q8N8Z6 715 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 APBB2Q92870 758 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 ZNF689Q96CS4 500 aaPredicted RBP14.05□□□□□ -0.16
LSS-201ENST00000356396 ERP27Q96DN0 273 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 DHRS4Q9BTZ2 278 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 FRMD8P1Q9BZ68 369 aaPredicted RBP14.05□□□□□ -0.16
LSS-201ENST00000356396 PNPLA8Q9NP80 782 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 SNX15Q9NRS6 342 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 SAGE1Q9NXZ1 904 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 RCOR3Q9P2K3 495 aaPredicted RBP14.05□□□□□ -0.16
LSS-201ENST00000356396 EMCNQ9ULC0 261 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 SPO11Q9Y5K1 396 aa14.05□□□□□ -0.16
LSS-201ENST00000356396 H7C4K7 107 aa14.04□□□□□ -0.16
LSS-201ENST00000356396 KRT37O76014 449 aa14.04□□□□□ -0.16
LSS-201ENST00000356396 KIAA0754O94854 1291 aa14.04□□□□□ -0.16
LSS-201ENST00000356396 CA3P07451 260 aa14.04□□□□□ -0.16
LSS-201ENST00000356396 PGAM1P18669 254 aa14.04□□□□□ -0.16
LSS-201ENST00000356396 ITGA9Q13797 1035 aa14.04□□□□□ -0.16
LSS-201ENST00000356396 ACCSLQ4AC99 568 aa14.04□□□□□ -0.16
LSS-201ENST00000356396 CAMK1DQ8IU85 385 aa14.04□□□□□ -0.16
LSS-201ENST00000356396 LPCAT1Q8NF37 534 aa14.04□□□□□ -0.16
LSS-201ENST00000356396 MARK4Q96L34 752 aa14.04□□□□□ -0.16
LSS-201ENST00000356396 FERMT1Q9BQL6 677 aa14.04□□□□□ -0.16
LSS-201ENST00000356396 MANSC1Q9H8J5 431 aa14.04□□□□□ -0.16
LSS-201ENST00000356396 SLC24A2Q9UI40 661 aa14.04□□□□□ -0.16
LSS-201ENST00000356396 RUVBL2Q9Y230 463 aaKnown RBP14.04□□□□□ -0.16
LSS-201ENST00000356396 GOLGA8QA0A0J9YX86 632 aa14.04□□□□□ -0.16
LSS-201ENST00000356396 GOLGA8OA6NCC3 632 aa14.04□□□□□ -0.16
LSS-201ENST00000356396 GOLGA8NF8WBI6 632 aa14.04□□□□□ -0.16
LSS-201ENST00000356396 FGBP02675 491 aa14.04□□□□□ -0.16
LSS-201ENST00000356396 RPLP2P05387 115 aaKnown RBP14.04□□□□□ -0.16
LSS-201ENST00000356396 PRKCHP24723 683 aa14.04□□□□□ -0.16
LSS-201ENST00000356396 HOXD9P28356 352 aaPredicted RBP14.04□□□□□ -0.16
LSS-201ENST00000356396 CA5AP35218 305 aa14.04□□□□□ -0.16
LSS-201ENST00000356396 CSKP41240 450 aa14.04□□□□□ -0.16
LSS-201ENST00000356396 KCNJ2P63252 427 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms