RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 KRT75O95678 551 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 ANXA6P08133 673 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 UMPSP11172 480 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 SARSP49591 514 aaKnown RBP11.38□□□□□ -0.59
FN1-204ENST00000356005 POM121L1PQ3SYA9 428 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 ATP13A5Q4VNC0 1218 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 FAM98BQ52LJ0 330 aaKnown RBP11.38□□□□□ -0.59
FN1-204ENST00000356005 FAAH2Q6GMR7 532 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 ZSCAN1Q8NBB4 408 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 PAFAH2Q99487 392 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 NRDE2Q9H7Z3 1164 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 DDX60Q8IY21 1712 aaKnown RBP11.38□□□□□ -0.59
FN1-204ENST00000356005 NUMBP49757 651 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 RAD23AP54725 363 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 TXNDC11Q6PKC3 985 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 CHSY3Q70JA7 882 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 FAM35AQ86V20 835 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 GALNT13Q8IUC8 556 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 ASZ1Q8WWH4 475 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 GULP1Q9UBP9 304 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 ARL5CA6NH57 179 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 CHURC1-FNTBB4DL54 471 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 CCDC159P0C7I6 412 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 SERPINB5P36952 375 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 PSMD8P48556 350 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 RAD23BP54727 409 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 LSM12Q3MHD2 195 aaKnown RBP11.38□□□□□ -0.59
FN1-204ENST00000356005 TCEAL5Q5H9L2 206 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 ATG4AQ8WYN0 398 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 SLC38A3Q99624 504 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 TBCDQ9BTW9 1192 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 BDH2Q9BUT1 245 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 EPB41L4BQ9H329 900 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 ROBO3Q96MS0 1386 aa11.38□□□□□ -0.59
FN1-204ENST00000356005 TAL1P17542 331 aaPredicted RBP11.37□□□□□ -0.59
FN1-204ENST00000356005 ACLYP53396 1101 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 MTM1Q13496 603 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 EOGTQ5NDL2 527 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 LAYNQ6UX15 382 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 PRR23BQ6ZRT6 265 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 COL26A1Q96A83 441 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 EBNA1BP2Q99848 306 aaKnown RBP11.37□□□□□ -0.59
FN1-204ENST00000356005 MID1IP1Q9NPA3 183 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 H3BQF6 201 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 TCN1P20061 433 aaPredicted RBP11.37□□□□□ -0.59
FN1-204ENST00000356005 FSHRP23945 695 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 LRRC38Q5VT99 294 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 RP9Q8TA86 221 aaKnown RBP11.37□□□□□ -0.59
FN1-204ENST00000356005 SEMA3CQ99985 751 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 KCNS3Q9BQ31 491 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 NDRG2Q9UN36 371 aaKnown RBP11.37□□□□□ -0.59
FN1-204ENST00000356005 WDR27A2RRH5 827 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 RASGRP1O95267 797 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 VAV1P15498 845 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 HOXC12P31275 282 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 SF1Q15637 639 aaKnown RBP11.37□□□□□ -0.59
FN1-204ENST00000356005 ATP13A4Q4VNC1 1196 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 MFSD7Q6UXD7 560 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 RASAL3Q86YV0 1011 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 UGT2B28Q9BY64 529 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 CLDND1Q9NY35 253 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 KRT34O76011 436 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 TMED1Q13445 227 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 CRYMQ14894 314 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 NEPROQ6NW34 567 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 SELENOMQ8WWX9 145 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 LHX5Q9H2C1 402 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 ASF1AQ9Y294 204 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 NFAT5O94916 1531 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 SMIM31A0A1B0GVY4 71 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 UBDO15205 165 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 TAF10Q12962 218 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 MKRN4PQ13434 485 aaPredicted RBP11.37□□□□□ -0.59
FN1-204ENST00000356005 ANKS1BQ7Z6G8 1248 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 FAM124AQ86V42 546 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 SRFBP1Q8NEF9 429 aaKnown RBP11.37□□□□□ -0.59
FN1-204ENST00000356005 B2RBV5 119 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 DNM1LO00429 736 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 IRF8Q02556 426 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 ESRP1Q6NXG1 681 aaKnown RBP11.37□□□□□ -0.59
FN1-204ENST00000356005 SYT12Q8IV01 421 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 ACTRT2Q8TDY3 377 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 C12orf42Q96LP6 360 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 THAP1Q9NVV9 213 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 C8AP07357 584 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 SLC1A6P48664 564 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 TRIM71Q2Q1W2 868 aaKnown RBP11.37□□□□□ -0.59
FN1-204ENST00000356005 CASP12Q6UXS9 341 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 TAF8Q7Z7C8 310 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 TERB1Q8NA31 727 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 ATG16L2Q8NAA4 619 aa11.37□□□□□ -0.59
FN1-204ENST00000356005 ZMYND8Q9ULU4 1186 aaPredicted RBP11.37□□□□□ -0.59
FN1-204ENST00000356005 SPATA31D3P0C874 917 aa11.36□□□□□ -0.59
FN1-204ENST00000356005 S100A3P33764 101 aa11.36□□□□□ -0.59
FN1-204ENST00000356005 GUCY1A3Q02108 690 aa11.36□□□□□ -0.59
FN1-204ENST00000356005 MACC1Q6ZN28 852 aa11.36□□□□□ -0.59
FN1-204ENST00000356005 SPATA31D4Q6ZUB0 917 aa11.36□□□□□ -0.59
FN1-204ENST00000356005 CHST9Q7L1S5 443 aa11.36□□□□□ -0.59
FN1-204ENST00000356005 NRSN1Q8IZ57 195 aa11.36□□□□□ -0.59
FN1-204ENST00000356005 AADATQ8N5Z0 425 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms