RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 SNX12Q9UMY4 172 aa18.14■□□□□ 0.49
PDLIM7-202ENST00000355841 FARP1Q9Y4F1 1045 aaPredicted RBP18.14■□□□□ 0.49
PDLIM7-202ENST00000355841 WASF2Q9Y6W5 498 aa18.14■□□□□ 0.49
PDLIM7-202ENST00000355841 IGSF6O95976 241 aa18.13■□□□□ 0.49
PDLIM7-202ENST00000355841 RBP3P10745 1247 aa18.13■□□□□ 0.49
PDLIM7-202ENST00000355841 HOXA6P31267 233 aa18.13■□□□□ 0.49
PDLIM7-202ENST00000355841 SLC8A1P32418 973 aa18.13■□□□□ 0.49
PDLIM7-202ENST00000355841 SCNN1BP51168 640 aa18.13■□□□□ 0.49
PDLIM7-202ENST00000355841 NUBP1P53384 320 aa18.13■□□□□ 0.49
PDLIM7-202ENST00000355841 ITKQ08881 620 aa18.13■□□□□ 0.49
PDLIM7-202ENST00000355841 FAM124AQ86V42 546 aa18.13■□□□□ 0.49
PDLIM7-202ENST00000355841 TEX26Q8N6G2 289 aa18.13■□□□□ 0.49
PDLIM7-202ENST00000355841 C1orf54Q8WWF1 131 aa18.13■□□□□ 0.49
PDLIM7-202ENST00000355841 C16orf45Q96MC5 204 aaPredicted RBP18.13■□□□□ 0.49
PDLIM7-202ENST00000355841 NSMCE3Q96MG7 304 aa18.13■□□□□ 0.49
PDLIM7-202ENST00000355841 QKIQ96PU8 341 aaKnown RBP eCLIP18.13■□□□□ 0.49
PDLIM7-202ENST00000355841 NAPGQ99747 312 aaPredicted RBP18.13■□□□□ 0.49
PDLIM7-202ENST00000355841 HEPHQ9BQS7 1158 aa18.13■□□□□ 0.49
PDLIM7-202ENST00000355841 SERGEFQ9UGK8 458 aa18.13■□□□□ 0.49
PDLIM7-202ENST00000355841 CYP8B1Q9UNU6 501 aa18.13■□□□□ 0.49
PDLIM7-202ENST00000355841 KPNA3O00505 521 aaPredicted RBP18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 PIGNO95427 931 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 POP4O95707 220 aaKnown RBP18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 DNTTP04053 509 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 HLA-DQB2P05538 268 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 ACADMP11310 421 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 RBL1P28749 1068 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 SIX1Q15475 284 aaPredicted RBP18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 LONRF2Q1L5Z9 754 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 SLC45A4Q5BKX6 768 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 DARS2Q6PI48 645 aaKnown RBP18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 SYT10Q6XYQ8 523 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 CNTD1Q8N815 330 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 PBKQ96KB5 322 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 AGAP3Q96P47 875 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 BRD8Q9H0E9 1235 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 FBRSQ9HAH7 460 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 DNPEPQ9ULA0 475 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 A0A1W2PP55 124 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 CTAGE9A4FU28 777 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 NEBLO76041 1014 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 UGT2B4P06133 528 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 TPMTP51580 245 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 IFI35P80217 286 aaPredicted RBP18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 XRCC4Q13426 336 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 SNX1Q13596 522 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 DSG4Q86SJ6 1040 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 SRLQ86TD4 932 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 LONP2Q86WA8 852 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 PLPP6Q8IY26 295 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 BBS5Q8N3I7 341 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 AADATQ8N5Z0 425 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 TTC13Q8NBP0 860 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 GANCQ8TET4 914 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 FATE1Q969F0 183 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 IL12RB2Q99665 862 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 MGME1Q9BQP7 344 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 NOD2Q9HC29 1040 aa18.12■□□□□ 0.49
PDLIM7-202ENST00000355841 HACD1B0YJ81 288 aa18.11■□□□□ 0.49
PDLIM7-202ENST00000355841 F5H423 210 aaPredicted RBP18.11■□□□□ 0.49
PDLIM7-202ENST00000355841 ALOX15BO15296 676 aa18.11■□□□□ 0.49
PDLIM7-202ENST00000355841 PRNPP04156 253 aa18.11■□□□□ 0.49
PDLIM7-202ENST00000355841 PTPN3P26045 913 aa18.11■□□□□ 0.49
PDLIM7-202ENST00000355841 ETF1P62495 437 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-202ENST00000355841 DSC2Q02487 901 aa18.11■□□□□ 0.49
PDLIM7-202ENST00000355841 ZNF33AQ06730 810 aa18.11■□□□□ 0.49
PDLIM7-202ENST00000355841 WASHC5Q12768 1159 aa18.11■□□□□ 0.49
PDLIM7-202ENST00000355841 KCTD19Q17RG1 926 aaPredicted RBP18.11■□□□□ 0.49
PDLIM7-202ENST00000355841 ZNF528Q3MIS6 628 aa18.11■□□□□ 0.49
PDLIM7-202ENST00000355841 NYAP1Q6ZVC0 841 aa18.11■□□□□ 0.49
PDLIM7-202ENST00000355841 WDR5BQ86VZ2 330 aa18.11■□□□□ 0.49
PDLIM7-202ENST00000355841 HTR3CQ8WXA8 447 aa18.11■□□□□ 0.49
PDLIM7-202ENST00000355841 NELL1Q92832 810 aa18.11■□□□□ 0.49
PDLIM7-202ENST00000355841 ARRDC3Q96B67 414 aa18.11■□□□□ 0.49
PDLIM7-202ENST00000355841 PABPC3Q9H361 631 aaKnown RBP18.11■□□□□ 0.49
PDLIM7-202ENST00000355841 ZSCAN32Q9NX65 697 aa18.11■□□□□ 0.49
PDLIM7-202ENST00000355841 FBXL12Q9NXK8 326 aa18.11■□□□□ 0.49
PDLIM7-202ENST00000355841 RAPGEFL1Q9UHV5 662 aa18.11■□□□□ 0.49
PDLIM7-202ENST00000355841 R4GN57 208 aa18.11■□□□□ 0.49
PDLIM7-202ENST00000355841 C1QTNF3-AMACRE9PGA6 284 aa18.1■□□□□ 0.49
PDLIM7-202ENST00000355841 HRO43593 1189 aa18.1■□□□□ 0.49
PDLIM7-202ENST00000355841 RNASEH2AO75792 299 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-202ENST00000355841 CR2P20023 1033 aa18.1■□□□□ 0.49
PDLIM7-202ENST00000355841 NSUN2Q08J23 767 aaKnown RBP eCLIP18.1■□□□□ 0.49
PDLIM7-202ENST00000355841 IHHQ14623 411 aa18.1■□□□□ 0.49
PDLIM7-202ENST00000355841 PAPD7Q5XG87 772 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-202ENST00000355841 CAMK1DQ8IU85 385 aa18.1■□□□□ 0.49
PDLIM7-202ENST00000355841 RASGEF1CQ8N431 466 aa18.1■□□□□ 0.49
PDLIM7-202ENST00000355841 HDDC3Q8N4P3 179 aa18.1■□□□□ 0.49
PDLIM7-202ENST00000355841 TMIEQ8NEW7 156 aa18.1■□□□□ 0.49
PDLIM7-202ENST00000355841 SLC35B2Q8TB61 432 aa18.1■□□□□ 0.49
PDLIM7-202ENST00000355841 SEMA3CQ99985 751 aa18.1■□□□□ 0.49
PDLIM7-202ENST00000355841 TMEM121Q9BTD3 319 aa18.1■□□□□ 0.49
PDLIM7-202ENST00000355841 AP1M1Q9BXS5 423 aa18.1■□□□□ 0.49
PDLIM7-202ENST00000355841 SCUBE2Q9NQ36 999 aa18.1■□□□□ 0.49
PDLIM7-202ENST00000355841 ITM2CQ9NQX7 267 aa18.1■□□□□ 0.49
PDLIM7-202ENST00000355841 USP36Q9P275 1121 aaKnown RBP18.1■□□□□ 0.49
PDLIM7-202ENST00000355841 KCNN4O15554 427 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 ADH1BP00325 375 aa18.09■□□□□ 0.49
PDLIM7-202ENST00000355841 C5AR1P21730 350 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms