RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 TSC2P49815 1807 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 HAS3O00219 553 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 CABYRO75952 493 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 PCSK1P29120 753 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 PAPOLAP51003 745 aaKnown RBP19.81■□□□□ 0.76
COL13A1-201ENST00000354547 SLC12A2P55011 1212 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 RAB10P61026 200 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 IRX1P78414 480 aaPredicted RBP19.81■□□□□ 0.76
COL13A1-201ENST00000354547 FLOT2Q14254 428 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 ZNF789Q5FWF6 425 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 PM20D1Q6GTS8 502 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 CXCL17Q6UXB2 119 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 AGMOQ6ZNB7 445 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 ZNF354CQ86Y25 554 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 PPHLN1Q8NEY8 458 aaKnown RBP19.81■□□□□ 0.76
COL13A1-201ENST00000354547 PGAP3Q96FM1 320 aaPredicted RBP19.81■□□□□ 0.76
COL13A1-201ENST00000354547 GLOD4Q9HC38 313 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 PDP2Q9P2J9 529 aa19.81■□□□□ 0.76
COL13A1-201ENST00000354547 AAR2Q9Y312 384 aaKnown RBP19.81■□□□□ 0.76
COL13A1-201ENST00000354547 VCLP18206 1134 aa19.8■□□□□ 0.76
COL13A1-201ENST00000354547 MAXP61244 160 aa19.8■□□□□ 0.76
COL13A1-201ENST00000354547 PRKAA1Q13131 559 aa19.8■□□□□ 0.76
COL13A1-201ENST00000354547 MAP2K5Q13163 448 aa19.8■□□□□ 0.76
COL13A1-201ENST00000354547 ART3Q13508 389 aa19.8■□□□□ 0.76
COL13A1-201ENST00000354547 METTL21CQ5VZV1 264 aa19.8■□□□□ 0.76
COL13A1-201ENST00000354547 KBTBD6Q86V97 674 aa19.8■□□□□ 0.76
COL13A1-201ENST00000354547 STYXQ8WUJ0 223 aa19.8■□□□□ 0.76
COL13A1-201ENST00000354547 FCRL2Q96LA5 508 aaPredicted RBP19.8■□□□□ 0.76
COL13A1-201ENST00000354547 HLA-DQB2P05538 268 aa19.8■□□□□ 0.76
COL13A1-201ENST00000354547 OR4Q2P0C623 313 aa19.8■□□□□ 0.76
COL13A1-201ENST00000354547 ARNTP27540 789 aa19.8■□□□□ 0.76
COL13A1-201ENST00000354547 INTS6LQ5JSJ4 861 aaKnown RBP19.8■□□□□ 0.76
COL13A1-201ENST00000354547 RBM20Q5T481 1227 aaKnown RBP19.8■□□□□ 0.76
COL13A1-201ENST00000354547 SDHAF4Q5VUM1 108 aa19.8■□□□□ 0.76
COL13A1-201ENST00000354547 CNSTQ6PJW8 725 aa19.8■□□□□ 0.76
COL13A1-201ENST00000354547 LDB1Q86U70 411 aaPredicted RBP19.8■□□□□ 0.76
COL13A1-201ENST00000354547 ARHGAP12Q8IWW6 846 aa19.8■□□□□ 0.76
COL13A1-201ENST00000354547 HEXDCQ8WVB3 486 aa19.8■□□□□ 0.76
COL13A1-201ENST00000354547 MCMBPQ9BTE3 642 aa19.8■□□□□ 0.76
COL13A1-201ENST00000354547 POMKQ9H5K3 350 aa19.8■□□□□ 0.76
COL13A1-201ENST00000354547 MID2Q9UJV3 735 aa19.8■□□□□ 0.76
COL13A1-201ENST00000354547 TLL2Q9Y6L7 1015 aa19.8■□□□□ 0.76
COL13A1-201ENST00000354547 UQCRBP14927 111 aa19.79■□□□□ 0.76
COL13A1-201ENST00000354547 TSPAN8P19075 237 aa19.79■□□□□ 0.76
COL13A1-201ENST00000354547 PPARGP37231 505 aaPredicted RBP19.79■□□□□ 0.76
COL13A1-201ENST00000354547 MRPS6P82932 125 aaKnown RBP19.79■□□□□ 0.76
COL13A1-201ENST00000354547 COG7P83436 770 aa19.79■□□□□ 0.76
COL13A1-201ENST00000354547 BTBD8Q5XKL5 378 aa19.79■□□□□ 0.76
COL13A1-201ENST00000354547 BNC2Q6ZN30 1099 aaPredicted RBP19.79■□□□□ 0.76
COL13A1-201ENST00000354547 TFAP2DQ7Z6R9 452 aa19.79■□□□□ 0.76
COL13A1-201ENST00000354547 COPS7BQ9H9Q2 264 aaPredicted RBP19.79■□□□□ 0.76
COL13A1-201ENST00000354547 PTCH2Q9Y6C5 1203 aa19.79■□□□□ 0.76
COL13A1-201ENST00000354547 APOA4P06727 396 aa19.79■□□□□ 0.76
COL13A1-201ENST00000354547 ALDH1A3P47895 512 aa19.79■□□□□ 0.76
COL13A1-201ENST00000354547 GNASQ5JWF2 1037 aa19.79■□□□□ 0.76
COL13A1-201ENST00000354547 DENND5AQ6IQ26 1287 aa19.79■□□□□ 0.76
COL13A1-201ENST00000354547 ADGRG6Q86SQ4 1221 aa19.79■□□□□ 0.76
COL13A1-201ENST00000354547 SCN4BQ8IWT1 228 aa19.79■□□□□ 0.76
COL13A1-201ENST00000354547 TXNDC5Q8NBS9 432 aaKnown RBP19.79■□□□□ 0.76
COL13A1-201ENST00000354547 ICA1LQ8NDH6 482 aa19.79■□□□□ 0.76
COL13A1-201ENST00000354547 PHF21BQ96EK2 531 aa19.79■□□□□ 0.76
COL13A1-201ENST00000354547 ANKRD6Q9Y2G4 727 aa19.79■□□□□ 0.76
COL13A1-201ENST00000354547 MAFKO60675 156 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 H2AFYO75367 372 aaKnown RBP19.78■□□□□ 0.76
COL13A1-201ENST00000354547 ITGB1P05556 798 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 ETS2P15036 469 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 MS4A2Q01362 244 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 TSTD2Q5T7W7 516 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 OR10T2Q8NGX3 314 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 CASP10Q92851 521 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 VCX3BQ9H321 246 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 AGO3Q9H9G7 860 aaKnown RBP19.78■□□□□ 0.76
COL13A1-201ENST00000354547 DTNAQ9Y4J8 743 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 FESP07332 822 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 GRIK1P39086 918 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 DPP6P42658 865 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 PURAQ00577 322 aaKnown RBP19.78■□□□□ 0.76
COL13A1-201ENST00000354547 CEACAM7Q14002 265 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 UPP1Q16831 310 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 PTAR1Q7Z6K3 402 aaPredicted RBP19.78■□□□□ 0.76
COL13A1-201ENST00000354547 C14orf80Q86SX3 495 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 PCDH20Q8N6Y1 951 aaKnown RBP19.78■□□□□ 0.76
COL13A1-201ENST00000354547 BHLHE22Q8NFJ8 381 aaPredicted RBP19.78■□□□□ 0.76
COL13A1-201ENST00000354547 WDR41Q9HAD4 459 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 DMAP1Q9NPF5 467 aaPredicted RBP19.78■□□□□ 0.76
COL13A1-201ENST00000354547 COPG1Q9Y678 874 aaKnown RBP19.78■□□□□ 0.76
COL13A1-201ENST00000354547 ANXA9O76027 345 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 PRDX6P30041 224 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 FOLH1Q04609 750 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 FBXL19Q6PCT2 694 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 C16orf89Q6UX73 402 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 GK5Q6ZS86 529 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 DPF3Q92784 378 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 RRN3Q9NYV6 651 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 ADA2Q9NZK5 511 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 STK39Q9UEW8 545 aa19.78■□□□□ 0.76
COL13A1-201ENST00000354547 ODC1P11926 461 aa19.77■□□□□ 0.76
COL13A1-201ENST00000354547 HDCP19113 662 aa19.77■□□□□ 0.76
COL13A1-201ENST00000354547 CCNCP24863 283 aa19.77■□□□□ 0.76
COL13A1-201ENST00000354547 ARCN1P48444 511 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms