RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 POMT1Q9Y6A1 747 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 ZNF462Q96JM2 2506 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CYP3A7-CYP3A51PA0A087WV96 503 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 TRAV34A0A0B4J273 112 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 A0A0U1RQK1 487 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 ZNF320A2RRD8 509 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 SMIM30A4D0T7 59 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 GAGE10A6NGK3 116 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 A8MXE2 369 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 A8MZ25 164 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 NPIPB11E5RHQ5 1161 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 GCOM1H8Y6P7 765 aaPredicted RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 TRIAP1O43715 76 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 NME6O75414 186 aaPredicted RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 DAB1O75553 588 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CNTN5O94779 1100 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 PENKP01210 267 aaPredicted RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 ALDOAP04075 364 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 MMP9P14780 707 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 IFNAR1P17181 557 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CYP3A7P24462 503 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 IDUAP35475 653 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CCR10P46092 362 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 PCP4P48539 62 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CXCR3P49682 368 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 MCM2P49736 904 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CDK7P50613 346 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 JAK3P52333 1124 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 RRP1P56182 461 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 IKQ13123 557 aaPredicted RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 KPNB1Q14974 876 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CLCA4Q14CN2 919 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 GJB7Q6PEY0 223 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 FOXR2Q6PJQ5 311 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 LCNL1Q6ZST4 164 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 EPHX4Q8IUS5 362 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 HSCBQ8IWL3 235 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CEP57L1Q8IYX8 460 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 GHDCQ8N2G8 530 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CPXM2Q8N436 756 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 POGLUT1Q8NBL1 392 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 DNAAF1Q8NEP3 725 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 DUSP19Q8WTR2 217 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 GDPD5Q8WTR4 605 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 ARHGEF2Q92974 986 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 FKBP10Q96AY3 582 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 RMDN1Q96DB5 314 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 PTCD3Q96EY7 689 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 EDC3Q96F86 508 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 KAZALD1Q96I82 304 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 TMEM237Q96Q45 408 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 KRTAP4-11Q9BYQ6 195 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 SH2D4AQ9H788 454 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 ZNF304Q9HCX3 659 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 SPATS2LQ9NUQ6 558 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 BABAM1Q9NWV8 329 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 EHD2Q9NZN4 543 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 MPP6Q9NZW5 540 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 KCNK7Q9Y2U2 307 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 RICTORQ6R327 1708 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 TRGV11A0A075B6L2 103 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 DDTLA6NHG4 134 aaPredicted RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 TAF4O00268 1085 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CLGNO14967 610 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 SCAMP1O15126 338 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 PRICKLE3O43900 615 aaPredicted RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 FMO6PO60774 539 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 SEC14L2O76054 403 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 TPOP07202 933 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 PKMP14618 531 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 TRIM21P19474 475 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CYP2C18P33260 490 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CPOXP36551 454 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 GNAQP50148 359 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 NPY4RP50391 375 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 ZNF41P51814 821 aaPredicted RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 VAV2P52735 878 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 POLGP54098 1239 aaPredicted RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 HSD17B7P56937 341 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 COASYQ13057 564 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 HLXQ14774 488 aaPredicted RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 ZRANB3Q5FWF4 1079 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 SGMS1Q86VZ5 419 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 KIAA2013Q8IYS2 634 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 FAM185AQ8N0U4 392 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 ZNF366Q8N895 744 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 SLC4A11Q8NBS3 891 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 B3GALNT2Q8NCR0 500 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CPEB3Q8NE35 698 aaKnown RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 GLMPQ8WWB7 406 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 HSPH1Q92598 858 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 EXOC4Q96A65 974 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 PPP1R13BQ96KQ4 1090 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 ZNF341Q9BYN7 854 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 ZWILCHQ9H900 591 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 RAB9BQ9NP90 201 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 AKAP7Q9P0M2 348 aaPredicted RBP1.72□□□□□ -2.13
BRCA1-202ENST00000354071 MTRRQ9UBK8 725 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 KCNE5Q9UJ90 142 aa1.72□□□□□ -2.13
BRCA1-202ENST00000354071 CCNL1Q9UK58 526 aaPredicted RBP1.72□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms