RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 FAM35AQ86V20 835 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 CEP97Q8IW35 865 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 ZMIZ2Q8NF64 920 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 NLGN2Q8NFZ4 835 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 PPP1R13LQ8WUF5 828 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 DGCR14Q96DF8 476 aaKnown RBP24.85■■□□□ 1.57
CPNE1-202ENST00000352393 TSGA13Q96PP4 275 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 MRPS26Q9BYN8 205 aaKnown RBP24.85■■□□□ 1.57
CPNE1-202ENST00000352393 CLIC5Q9NZA1 410 aa24.85■■□□□ 1.57
CPNE1-202ENST00000352393 TMEM233B4DJY2 109 aa24.84■■□□□ 1.57
CPNE1-202ENST00000352393 SDHDO14521 159 aa24.84■■□□□ 1.57
CPNE1-202ENST00000352393 LRIG2O94898 1065 aa24.84■■□□□ 1.57
CPNE1-202ENST00000352393 CLPTM1O96005 669 aa24.84■■□□□ 1.57
CPNE1-202ENST00000352393 FAM163BP0C2L3 166 aa24.84■■□□□ 1.57
CPNE1-202ENST00000352393 HSPA13P48723 471 aa24.84■■□□□ 1.57
CPNE1-202ENST00000352393 SNX17Q15036 470 aa24.84■■□□□ 1.57
CPNE1-202ENST00000352393 SLC5A9Q2M3M2 681 aa24.84■■□□□ 1.57
CPNE1-202ENST00000352393 PCID2Q5JVF3 399 aa24.84■■□□□ 1.57
CPNE1-202ENST00000352393 BHLHA9Q7RTU4 235 aa24.84■■□□□ 1.57
CPNE1-202ENST00000352393 TMEM30AQ9NV96 361 aa24.84■■□□□ 1.57
CPNE1-202ENST00000352393 PTTG2Q9NZH5 202 aa24.84■■□□□ 1.57
CPNE1-202ENST00000352393 OR12D3Q9UGF7 316 aa24.84■■□□□ 1.57
CPNE1-202ENST00000352393 LZTS1Q9Y250 596 aa24.84■■□□□ 1.57
CPNE1-202ENST00000352393 VILLO15195 856 aa24.83■■□□□ 1.57
CPNE1-202ENST00000352393 TNFAIP8O95379 198 aa24.83■■□□□ 1.57
CPNE1-202ENST00000352393 SRGAP2BP0DMP2 458 aa24.83■■□□□ 1.57
CPNE1-202ENST00000352393 CXCR3P49682 368 aa24.83■■□□□ 1.57
CPNE1-202ENST00000352393 CREB5Q02930 508 aa24.83■■□□□ 1.57
CPNE1-202ENST00000352393 TTLL12Q14166 644 aaPredicted RBP24.83■■□□□ 1.57
CPNE1-202ENST00000352393 USP41Q3LFD5 358 aa24.83■■□□□ 1.57
CPNE1-202ENST00000352393 ARMC3Q5W041 872 aa24.83■■□□□ 1.57
CPNE1-202ENST00000352393 CTU1Q7Z7A3 348 aaKnown RBP24.83■■□□□ 1.57
CPNE1-202ENST00000352393 DENND6AQ8IWF6 608 aa24.83■■□□□ 1.57
CPNE1-202ENST00000352393 METTL25Q8N6Q8 603 aa24.83■■□□□ 1.57
CPNE1-202ENST00000352393 TMEM102Q8N9M5 508 aaPredicted RBP24.83■■□□□ 1.57
CPNE1-202ENST00000352393 NXNL1Q96CM4 212 aa24.83■■□□□ 1.57
CPNE1-202ENST00000352393 CELF6Q96J87 481 aaKnown RBP24.83■■□□□ 1.57
CPNE1-202ENST00000352393 ZFRQ96KR1 1074 aaKnown RBP24.83■■□□□ 1.57
CPNE1-202ENST00000352393 NPAS2Q99743 824 aa24.83■■□□□ 1.57
CPNE1-202ENST00000352393 RRN3Q9NYV6 651 aa24.83■■□□□ 1.57
CPNE1-202ENST00000352393 IPPQ9Y573 584 aa24.83■■□□□ 1.57
CPNE1-202ENST00000352393 FAM95CA0A1B0GW59 222 aa24.83■■□□□ 1.57
CPNE1-202ENST00000352393 USP17L7P0C7H9 530 aa24.83■■□□□ 1.57
CPNE1-202ENST00000352393 IGFBP6P24592 240 aaPredicted RBP24.83■■□□□ 1.57
CPNE1-202ENST00000352393 PELI3Q8N2H9 469 aa24.83■■□□□ 1.57
CPNE1-202ENST00000352393 SMG8Q8ND04 991 aaKnown RBP24.83■■□□□ 1.57
CPNE1-202ENST00000352393 CDCA5Q96FF9 252 aa24.83■■□□□ 1.57
CPNE1-202ENST00000352393 CNBD2Q96M20 576 aa24.83■■□□□ 1.57
CPNE1-202ENST00000352393 TBL1YQ9BQ87 522 aa24.83■■□□□ 1.57
CPNE1-202ENST00000352393 RBM38Q9H0Z9 239 aaKnown RBP24.83■■□□□ 1.57
CPNE1-202ENST00000352393 MRPL46Q9H2W6 279 aaKnown RBP24.83■■□□□ 1.57
CPNE1-202ENST00000352393 GNEQ9Y223 722 aaKnown RBP24.83■■□□□ 1.57
CPNE1-202ENST00000352393 TRPC5OSA6NMA1 111 aa24.82■■□□□ 1.56
CPNE1-202ENST00000352393 TRIM38O00635 465 aa24.82■■□□□ 1.56
CPNE1-202ENST00000352393 DDNO94850 711 aaPredicted RBP24.82■■□□□ 1.56
CPNE1-202ENST00000352393 F9P00740 461 aa24.82■■□□□ 1.56
CPNE1-202ENST00000352393 ARNTP27540 789 aa24.82■■□□□ 1.56
CPNE1-202ENST00000352393 GJA5P36382 358 aa24.82■■□□□ 1.56
CPNE1-202ENST00000352393 ARCN1P48444 511 aaKnown RBP24.82■■□□□ 1.56
CPNE1-202ENST00000352393 CDKL1Q00532 357 aa24.82■■□□□ 1.56
CPNE1-202ENST00000352393 ZNF33AQ06730 810 aa24.82■■□□□ 1.56
CPNE1-202ENST00000352393 LAMB3Q13751 1172 aa24.82■■□□□ 1.56
CPNE1-202ENST00000352393 PM20D1Q6GTS8 502 aa24.82■■□□□ 1.56
CPNE1-202ENST00000352393 CCNYL1Q8N7R7 359 aa24.82■■□□□ 1.56
CPNE1-202ENST00000352393 TXNDC5Q8NBS9 432 aaKnown RBP24.82■■□□□ 1.56
CPNE1-202ENST00000352393 GTF3C2Q8WUA4 911 aaPredicted RBP24.82■■□□□ 1.56
CPNE1-202ENST00000352393 NMD3Q96D46 503 aaKnown RBP24.82■■□□□ 1.56
CPNE1-202ENST00000352393 TKTL2Q9H0I9 626 aa24.82■■□□□ 1.56
CPNE1-202ENST00000352393 UTP6Q9NYH9 597 aaKnown RBP24.82■■□□□ 1.56
CPNE1-202ENST00000352393 PTGESO14684 152 aa24.82■■□□□ 1.56
CPNE1-202ENST00000352393 STMN1P16949 149 aa24.82■■□□□ 1.56
CPNE1-202ENST00000352393 APOFQ13790 326 aa24.82■■□□□ 1.56
CPNE1-202ENST00000352393 GK3PQ14409 553 aa24.82■■□□□ 1.56
CPNE1-202ENST00000352393 RBM44Q6ZP01 1051 aaKnown RBP24.82■■□□□ 1.56
CPNE1-202ENST00000352393 PIWIL4Q7Z3Z4 852 aaKnown RBP24.82■■□□□ 1.56
CPNE1-202ENST00000352393 SPATA22Q8NHS9 363 aa24.82■■□□□ 1.56
CPNE1-202ENST00000352393 USP33Q8TEY7 942 aa24.82■■□□□ 1.56
CPNE1-202ENST00000352393 TMA16Q96EY4 203 aaKnown RBP24.82■■□□□ 1.56
CPNE1-202ENST00000352393 WDCPQ9H6R7 721 aa24.82■■□□□ 1.56
CPNE1-202ENST00000352393 UTRNP46939 3433 aa24.81■■□□□ 1.56
CPNE1-202ENST00000352393 PSMD8P48556 350 aa24.81■■□□□ 1.56
CPNE1-202ENST00000352393 COG7P83436 770 aa24.81■■□□□ 1.56
CPNE1-202ENST00000352393 CTBP1Q13363 440 aa24.81■■□□□ 1.56
CPNE1-202ENST00000352393 MAP7Q14244 749 aa24.81■■□□□ 1.56
CPNE1-202ENST00000352393 PTK2BQ14289 1009 aa24.81■■□□□ 1.56
CPNE1-202ENST00000352393 NADK2Q4G0N4 442 aa24.81■■□□□ 1.56
CPNE1-202ENST00000352393 ARHGAP22Q7Z5H3 698 aa24.81■■□□□ 1.56
CPNE1-202ENST00000352393 SLC2A11Q9BYW1 496 aa24.81■■□□□ 1.56
CPNE1-202ENST00000352393 CNOT11Q9UKZ1 510 aaKnown RBP24.81■■□□□ 1.56
CPNE1-202ENST00000352393 AAR2Q9Y312 384 aaKnown RBP24.81■■□□□ 1.56
CPNE1-202ENST00000352393 HHLA1C9JL84 531 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 ATXN3P54252 364 aaPredicted RBP24.8■■□□□ 1.56
CPNE1-202ENST00000352393 DNAJB13P59910 316 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 POU6F1Q14863 301 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 SH2D4BQ5SQS7 431 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 C6orf52Q5T4I8 152 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 DENND5AQ6IQ26 1287 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 DCLRE1AQ6PJP8 1040 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 GK5Q6ZS86 529 aa24.8■■□□□ 1.56
CPNE1-202ENST00000352393 DNAJB3Q8WWF6 145 aa24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms