RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 ZFRQ96KR1 1074 aaKnown RBP16.17■□□□□ 0.18
PTPN11-201ENST00000351677 CYP2A6P11509 494 aaPredicted RBP16.17■□□□□ 0.18
PTPN11-201ENST00000351677 PPP2R1BP30154 601 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 FASTKD3Q14CZ7 662 aaKnown RBP16.17■□□□□ 0.18
PTPN11-201ENST00000351677 NPY5RQ15761 445 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 SLC25A52Q3SY17 297 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 ZNF276Q8N554 614 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 MRPL57Q9BQC6 102 aaKnown RBP16.17■□□□□ 0.18
PTPN11-201ENST00000351677 LRMDAQ9H2I8 198 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 ANAPC2Q9UJX6 822 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 RGSL1A5PLK6 1076 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 FAM220BPB1ANY3 271 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 BIRC5O15392 142 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 SERPINA6P08185 405 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 PSME3P61289 254 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 PTPRNQ16849 979 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 PPM1LQ5SGD2 360 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 LIPMQ5VYY2 423 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 TYW3Q6IPR3 259 aaKnown RBP16.17■□□□□ 0.18
PTPN11-201ENST00000351677 NKAPQ8N5F7 415 aaKnown RBP16.17■□□□□ 0.18
PTPN11-201ENST00000351677 ACTRT2Q8TDY3 377 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 SELENOMQ8WWX9 145 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 DLG3Q92796 817 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 VPS45Q9NRW7 570 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 RAP2CQ9Y3L5 183 aa16.17■□□□□ 0.18
PTPN11-201ENST00000351677 KCNH1O95259 989 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 SP100P23497 879 aaPredicted RBP16.16■□□□□ 0.18
PTPN11-201ENST00000351677 GRIK3Q13003 919 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 TNPO3Q9Y5L0 923 aaKnown RBP16.16■□□□□ 0.18
PTPN11-201ENST00000351677 CYP7B1O75881 506 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 COX7A2P14406 83 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 PCBP1Q15365 356 aaKnown RBP eCLIP16.16■□□□□ 0.18
PTPN11-201ENST00000351677 POM121L1PQ3SYA9 428 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 FGD3Q5JSP0 725 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 PPTC7Q8NI37 304 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 MAGEE2Q8TD90 523 aaPredicted RBP16.16■□□□□ 0.18
PTPN11-201ENST00000351677 KLHL5Q96PQ7 755 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 C12orf65Q9H3J6 166 aaKnown RBP16.16■□□□□ 0.18
PTPN11-201ENST00000351677 HDAC3O15379 428 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 ANPEPP15144 967 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 TKTP29401 623 aaKnown RBP16.16■□□□□ 0.18
PTPN11-201ENST00000351677 PIK3R5Q8WYR1 880 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 RCN3Q96D15 328 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 FCRL2Q96LA5 508 aaPredicted RBP16.16■□□□□ 0.18
PTPN11-201ENST00000351677 ADPRHL2Q9NX46 363 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 C15orf38-AP3S2A0A0A6YYH1 394 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 TBL1XO60907 577 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 LRCH4O75427 683 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 ACSM2AQ08AH3 577 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 FNDC3BQ53EP0 1204 aaKnown RBP16.16■□□□□ 0.18
PTPN11-201ENST00000351677 SETMARQ53H47 684 aaPredicted RBP16.16■□□□□ 0.18
PTPN11-201ENST00000351677 ALFQ53S48 1182 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 ACSM2BQ68CK6 577 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 TSHZ1Q6ZSZ6 1077 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 ARPINQ7Z6K5 226 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 TRAPPC5Q8IUR0 188 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 HOMEZQ8IX15 550 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 HDAC10Q969S8 669 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 CSPG4P5Q96PW8 444 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 ZCCHC2Q9C0B9 1178 aaKnown RBP16.16■□□□□ 0.18
PTPN11-201ENST00000351677 RAD18Q9NS91 495 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 FAM105AQ9NUU6 356 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 ARHGAP28Q9P2N2 729 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 FBXO5Q9UKT4 447 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 GTF2A1LQ9UNN4 478 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 CILPO75339 1184 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 AMHP03971 560 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 TOP6BLQ8N6T0 577 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 C2orf49Q9BVC5 232 aaPredicted RBP16.16■□□□□ 0.18
PTPN11-201ENST00000351677 PAIP1Q9H074 479 aaKnown RBP16.16■□□□□ 0.18
PTPN11-201ENST00000351677 CNGB3Q9NQW8 809 aa16.16■□□□□ 0.18
PTPN11-201ENST00000351677 PIK3R1P27986 724 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 ATP1A4Q13733 1029 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 AFTPHQ6ULP2 937 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 ZFP14Q9HCL3 533 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 RPS6KB2Q9UBS0 482 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 CNTNAP1P78357 1384 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 CD48P09326 243 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 POLR2EP19388 210 aaKnown RBP16.15■□□□□ 0.18
PTPN11-201ENST00000351677 RPL9P32969 192 aaKnown RBP16.15■□□□□ 0.18
PTPN11-201ENST00000351677 KRT20P35900 424 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 LCLAT1Q6UWP7 414 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 CYLDQ9NQC7 956 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 ACSS2Q9NR19 701 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 PTCH2Q9Y6C5 1203 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 CLUHO75153 1309 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 SF3B1O75533 1304 aaKnown RBP eCLIP16.15■□□□□ 0.184e-6■■■■■ 89
PTPN11-201ENST00000351677 UBR1Q8IWV7 1749 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 MSI1O43347 362 aaKnown RBP16.15■□□□□ 0.18
PTPN11-201ENST00000351677 PIK3CGP48736 1102 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 POLR2LP62875 67 aaKnown RBP16.15■□□□□ 0.18
PTPN11-201ENST00000351677 GBE1Q04446 702 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 SGCGQ13326 291 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 C16orf72Q14CZ0 275 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 SLC1A5Q15758 541 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 CDYL2Q8N8U2 506 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 ACADMP11310 421 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 CDKN2BP42772 138 aa16.15■□□□□ 0.18
PTPN11-201ENST00000351677 PPIDQ08752 370 aaKnown RBP16.15■□□□□ 0.18
PTPN11-201ENST00000351677 PREPLQ4J6C6 727 aaPredicted RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms