RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 OSTM1Q86WC4 334 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 SNX31Q8N9S9 440 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 SLC44A1Q8WWI5 657 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 LZICQ8WZA0 190 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 ZNF75CPQ92670 426 aaPredicted RBP12.31□□□□□ -0.44
SMAD9-201ENST00000350148 SEMA3CQ99985 751 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 CORO1BQ9BR76 489 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 CIPCQ9C0C6 399 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 SMOC2Q9H3U7 446 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 GRHL1Q9NZI5 618 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 PCDHGB4Q9UN71 923 aa12.31□□□□□ -0.44
SMAD9-201ENST00000350148 MRPS23Q9Y3D9 190 aaKnown RBP12.31□□□□□ -0.44
SMAD9-201ENST00000350148 TCRBV7S2A1N4TA0A589 114 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 HNRNPCL2B2RXH8 293 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 PDE5AO76074 875 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 LRIG2O94898 1065 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 SHBGP04278 402 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 HOXA11P31270 313 aaPredicted RBP12.3□□□□□ -0.44
SMAD9-201ENST00000350148 GBE1Q04446 702 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 GPR17Q13304 367 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 TRABD2AQ86V40 505 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 HEXDCQ8WVB3 486 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 ZNF333Q96JL9 665 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 DKK3Q9UBP4 350 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 MCM8Q9UJA3 840 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 AGO1Q9UL18 857 aaKnown RBP12.3□□□□□ -0.44
SMAD9-201ENST00000350148 YJEFN3A6XGL0 299 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 E7ENQ6 273 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 SUPT7LO94864 414 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 HOXD8P13378 290 aaPredicted RBP12.3□□□□□ -0.44
SMAD9-201ENST00000350148 BGNP21810 368 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 STARD3Q14849 445 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 UPP1Q16831 310 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 PKN3Q6P5Z2 889 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 ANKS1BQ7Z6G8 1248 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 ZNF483Q8TF39 744 aaPredicted RBP12.3□□□□□ -0.44
SMAD9-201ENST00000350148 MPP4Q96JB8 637 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 CDHR5Q9HBB8 845 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 DNAJC16Q9Y2G8 782 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 RAD51BO15315 384 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 SYNCRIPO60506 623 aaKnown RBP12.3□□□□□ -0.44
SMAD9-201ENST00000350148 GABRR2P28476 465 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 COPAP53621 1224 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 WNT3AP56704 352 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 KLC1Q07866 573 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 CES5AQ6NT32 575 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 PRPF39Q86UA1 669 aaKnown RBP12.3□□□□□ -0.44
SMAD9-201ENST00000350148 RNF217Q8TC41 542 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 MAGEB10Q96LZ2 347 aaPredicted RBP12.3□□□□□ -0.44
SMAD9-201ENST00000350148 PTPN18Q99952 460 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 KCNK4Q9NYG8 393 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 ADA2Q9NZK5 511 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 HEY2Q9UBP5 337 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 ARHGAP26Q9UNA1 814 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 TCRBV9S1A1TA0A576 114 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 NT5C1B-RDH14C9J2C7 533 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 USP1O94782 785 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 CAPN1P07384 714 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 OR4Q2P0C623 313 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 SERPINB3P29508 390 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 IFNA8P32881 189 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 CSHL1Q14406 222 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 INPP5AQ14642 412 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 PDK4Q16654 411 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 SLC9A4Q6AI14 798 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 KIAA0408Q6ZU52 694 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 BEND5Q7L4P6 421 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 TDRD5Q8NAT2 981 aaKnown RBP12.3□□□□□ -0.44
SMAD9-201ENST00000350148 CCDC138Q96M89 665 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 SAR1AQ9NR31 198 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 EIF3LQ9Y262 564 aaKnown RBP12.3□□□□□ -0.44
SMAD9-201ENST00000350148 TNPO3Q9Y5L0 923 aaKnown RBP12.3□□□□□ -0.44
SMAD9-201ENST00000350148 RGPD3A6NKT7 1758 aaPredicted RBP12.3□□□□□ -0.44
SMAD9-201ENST00000350148 RGPD4Q7Z3J3 1758 aa12.3□□□□□ -0.44
SMAD9-201ENST00000350148 PPEF2O14830 753 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 ESRRBO95718 433 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 SKIV2L2P42285 1042 aaKnown RBP12.29□□□□□ -0.44
SMAD9-201ENST00000350148 SLC1A6P48664 564 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 SDHAF4Q5VUM1 108 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 NPY6RQ99463 290 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 LRRC4CQ9HCJ2 640 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 MARCOQ9UEW3 520 aaPredicted RBP12.29□□□□□ -0.44
SMAD9-201ENST00000350148 ZNF229Q9UJW7 825 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 ANKRD31Q8N7Z5 1873 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 COL11A2P13942 1736 aaPredicted RBP12.29□□□□□ -0.44
SMAD9-201ENST00000350148 GRM6O15303 877 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 LTA4HP09960 611 aaKnown RBP12.29□□□□□ -0.44
SMAD9-201ENST00000350148 LPOP22079 712 aaPredicted RBP12.29□□□□□ -0.44
SMAD9-201ENST00000350148 PPIDQ08752 370 aaKnown RBP12.29□□□□□ -0.44
SMAD9-201ENST00000350148 DCAF12L1Q5VU92 463 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 C16orf59Q7L2K0 433 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 YTHDF3Q7Z739 585 aaKnown RBP12.29□□□□□ -0.44
SMAD9-201ENST00000350148 ADH1CP00326 375 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 CYP11A1P05108 521 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 CYP2A7P20853 494 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 ARHGDIAP52565 204 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 KCNK10P57789 538 aa12.29□□□□□ -0.44
SMAD9-201ENST00000350148 PAFAH1B3Q15102 231 aaKnown RBP12.29□□□□□ -0.44
SMAD9-201ENST00000350148 AASDHQ4L235 1098 aaPredicted RBP12.29□□□□□ -0.44
SMAD9-201ENST00000350148 LONP2Q86WA8 852 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms