RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 FAM131CQ96AQ9 280 aa16.02■□□□□ 0.16
TSPAN4-201ENST00000346501 ARRDC3Q96B67 414 aa16.02■□□□□ 0.16
TSPAN4-201ENST00000346501 CINPQ9BW66 212 aaPredicted RBP16.02■□□□□ 0.16
TSPAN4-201ENST00000346501 NOL6Q9H6R4 1146 aaKnown RBP16.02■□□□□ 0.16
TSPAN4-201ENST00000346501 LRRC19Q9H756 370 aa16.02■□□□□ 0.16
TSPAN4-201ENST00000346501 RCOR3Q9P2K3 495 aaPredicted RBP16.02■□□□□ 0.16
TSPAN4-201ENST00000346501 ANKRD6Q9Y2G4 727 aa16.02■□□□□ 0.16
TSPAN4-201ENST00000346501 PCDHB9Q9Y5E1 797 aa16.02■□□□□ 0.16
TSPAN4-201ENST00000346501 WASF2Q9Y6W5 498 aa16.02■□□□□ 0.16
TSPAN4-201ENST00000346501 WDR87Q6ZQQ6 2873 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 NYNRINQ9P2P1 1898 aaKnown RBP16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 UPK3BL1B0FP48 263 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 UPK3BL2E5RIL1 263 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 PRAMEF26H0Y7S4 382 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 TM4SF5O14894 197 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 VILLO15195 856 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 PRAMEF11O60813 436 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 RNGTTO60942 597 aaKnown RBP16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 PALMO75781 387 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 KCNK5O95279 499 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 CD160O95971 181 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 ADRB3P13945 408 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 IL1R2P27930 398 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 MAT2AP31153 395 aaKnown RBP16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 GJC1P36383 396 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 RENBPP51606 427 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 METAP1P53582 386 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 OVGP1Q12889 678 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 SPA17Q15506 151 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 ASTE1Q2TB18 679 aaPredicted RBP16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 HLA-BQ31612 363 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 INAVAQ3KP66 663 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 PIP5KL1Q5T9C9 394 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 PSAPL1Q6NUJ1 521 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 GDPD4Q6W3E5 623 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 POLNQ7Z5Q5 900 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 KCTD6Q8NC69 237 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 OR6K2Q8NGY2 324 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 C1orf216Q8TAB5 229 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 CHP1Q99653 195 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 SLC39A8Q9C0K1 460 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 SPTLC3Q9NUV7 552 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 HAUS2Q9NVX0 235 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 INTUQ9ULD6 942 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 ACTL7AQ9Y615 435 aa16.01■□□□□ 0.15
TSPAN4-201ENST00000346501 A0A1W2PQU0 124 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 TMEM110-MUSTN1A8MSY1 372 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 LATO43561 262 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 ZNF821O75541 412 aaPredicted RBP16■□□□□ 0.15
TSPAN4-201ENST00000346501 UGT2B4P06133 528 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 ZNF883P0CG24 379 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 AKT2P31751 481 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 MAN1A1P33908 653 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 CYLC1P35663 651 aaPredicted RBP16■□□□□ 0.15
TSPAN4-201ENST00000346501 ARHGAP25P42331 645 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 RPS21P63220 83 aaKnown RBP16■□□□□ 0.15
TSPAN4-201ENST00000346501 IL10RBQ08334 325 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 TBX2Q13207 712 aaPredicted RBP16■□□□□ 0.15
TSPAN4-201ENST00000346501 SGCGQ13326 291 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 DPYSQ14117 519 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 MESDQ14696 234 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 PDK2Q15119 407 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 KIF19Q2TAC6 998 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 ATXN7L2Q5T6C5 722 aaPredicted RBP16■□□□□ 0.15
TSPAN4-201ENST00000346501 KIAA1161Q6NSJ0 714 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 CYP4V2Q6ZWL3 525 aaPredicted RBP16■□□□□ 0.15
TSPAN4-201ENST00000346501 IQCHQ86VS3 1027 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 HORMAD1Q86X24 394 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 LRRC49Q8IUZ0 686 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 OXR1Q8N573 874 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 SLC35G2Q8TBE7 412 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 MRFAP1L1Q96HT8 127 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 SLC6A18Q96N87 628 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 CSPG4P5Q96PW8 444 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 CALN1Q9BXU9 219 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 PCDH18Q9HCL0 1135 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 GDF3Q9NR23 364 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 TM7SF3Q9NS93 570 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 IPO11Q9UI26 975 aaKnown RBP16■□□□□ 0.15
TSPAN4-201ENST00000346501 NENFQ9UMX5 172 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 MFHAS1Q9Y4C4 1052 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 CACNA1EQ15878 2313 aa16■□□□□ 0.15
TSPAN4-201ENST00000346501 C16orf96A6NNT2 1141 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 GOLGA6L6A8MZA4 724 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 YKT6O15498 198 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 TSPAN6O43657 245 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 AP1G1O43747 822 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 NEBLO76041 1014 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 AMPD1P23109 780 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 ARRB1P49407 418 aaPredicted RBP15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 CCT8P50990 548 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 SUOXP51687 545 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 ZNF75DP51815 510 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 PPP2CBP62714 309 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 PPP2CAP67775 309 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 SLC25A11Q02978 314 aaKnown RBP15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 ZNF235Q14590 738 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 TTC7BQ86TV6 843 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 CCDC170Q8IYT3 715 aa15.99■□□□□ 0.15
TSPAN4-201ENST00000346501 ATPAF2Q8N5M1 289 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms