RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 FAM32AQ9Y421 112 aaKnown RBP15.32■□□□□ 0.04
BRAT1-201ENST00000340611 HBS1LQ9Y450 684 aaKnown RBP15.32■□□□□ 0.04
BRAT1-201ENST00000340611 TIMM22Q9Y584 194 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 PCDHGB5Q9Y5G0 923 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 PATJQ8NI35 1801 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 GREB1Q4ZG55 1949 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 PLXNA4Q9HCM2 1894 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 MYO18AQ92614 2054 aaKnown RBP15.32■□□□□ 0.04
BRAT1-201ENST00000340611 MOCS2O96007 188 aaPredicted RBP15.32■□□□□ 0.04
BRAT1-201ENST00000340611 SOD2P04179 222 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 LINC00271P0C7V0 271 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 TUFMP49411 452 aaKnown RBP15.32■□□□□ 0.04
BRAT1-201ENST00000340611 GDF10P55107 478 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 TAF10Q12962 218 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 RNASEH2BQ5TBB1 312 aaKnown RBP15.32■□□□□ 0.04
BRAT1-201ENST00000340611 BTBD8Q5XKL5 378 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 DENND5BQ6ZUT9 1274 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 ALLCQ8N6M5 410 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 PQLC3Q8N755 202 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 PYROXD1Q8WU10 500 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 RNF34Q969K3 372 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 SIK2Q9H0K1 926 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 CYP4F11Q9HBI6 524 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 TIMMDC1Q9NPL8 285 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 MTRRQ9UBK8 725 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 SLC24A2Q9UI40 661 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 APPL1Q9UKG1 709 aa15.32■□□□□ 0.04
BRAT1-201ENST00000340611 FAM237BA0A1B0GVD1 139 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 H3BRJ5 948 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 FCHO1O14526 889 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 HNRNPCL1O60812 293 aaKnown RBP15.31■□□□□ 0.04
BRAT1-201ENST00000340611 TRMUO75648 421 aaKnown RBP15.31■□□□□ 0.04
BRAT1-201ENST00000340611 FGF18O76093 207 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 TFAP2AP05549 437 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 HMBSP08397 361 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 MYL2P10916 166 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 CRABP2P29373 138 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 ENTPD1P49961 510 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 ARL4CP56559 192 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 CDK16Q00536 496 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 PPIGQ13427 754 aaKnown RBP eCLIP15.31■□□□□ 0.042e-7■■■□□ 16.7
BRAT1-201ENST00000340611 HIF1AQ16665 826 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 EFHC2Q5JST6 749 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 FNBP1LQ5T0N5 605 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 C1orf146Q5VVC0 180 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 IYDQ6PHW0 289 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 C3orf62Q6ZUJ4 267 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 MIB1Q86YT6 1006 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 PPP4R1Q8TF05 950 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 NT5C3BQ969T7 300 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 FAM111AQ96PZ2 611 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 THTPAQ9BU02 230 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 NMUR2Q9GZQ4 415 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 STAP1Q9ULZ2 295 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 SCAMP3O14828 347 aaKnown RBP15.31■□□□□ 0.04
BRAT1-201ENST00000340611 ENO1P06733 434 aaKnown RBP15.31■□□□□ 0.04
BRAT1-201ENST00000340611 GLUD2P49448 558 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 AP2B1P63010 937 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 ITGA9Q13797 1035 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 SPDYAQ5MJ70 313 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 TTC16Q8NEE8 873 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 ZNF398Q8TD17 642 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 SKA1Q96BD8 255 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 CEP295NLQ96MC4 621 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 MRPL1Q9BYD6 325 aaKnown RBP15.31■□□□□ 0.04
BRAT1-201ENST00000340611 TPK1Q9H3S4 243 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 CERS4Q9HA82 394 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 ATAD3AQ9NVI7 634 aa15.31■□□□□ 0.04
BRAT1-201ENST00000340611 C15orf38-AP3S2A0A0A6YYH1 394 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 B2RBV5 119 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 TLL1O43897 1013 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 CHN2P52757 468 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 LMNB2Q03252 620 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 GBE1Q04446 702 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 MORF4L2Q15014 288 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 PDCD4Q53EL6 469 aaKnown RBP15.3■□□□□ 0.04
BRAT1-201ENST00000340611 BOLA3Q53S33 107 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 METTL21CQ5VZV1 264 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 ARPINQ7Z6K5 226 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 CMTR2Q8IYT2 770 aaKnown RBP15.3■□□□□ 0.04
BRAT1-201ENST00000340611 FIBCD1Q8N539 461 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 FBXO32Q969P5 355 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 TKTL2Q9H0I9 626 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 FZD10Q9ULW2 581 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 FADS3Q9Y5Q0 445 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 SPTBN5Q9NRC6 3674 aaKnown RBP15.3■□□□□ 0.04
BRAT1-201ENST00000340611 E9PBE3 544 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 H7C4K7 107 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 HAPLN1P10915 354 aaPredicted RBP15.3■□□□□ 0.04
BRAT1-201ENST00000340611 RPL5P46777 297 aaKnown RBP15.3■□□□□ 0.04
BRAT1-201ENST00000340611 CLPPQ16740 277 aaPredicted RBP15.3■□□□□ 0.04
BRAT1-201ENST00000340611 BBS9Q3SYG4 887 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 Q6ZNX1 250 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 STRADAQ7RTN6 431 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 BBS5Q8N3I7 341 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 PLD5Q8N7P1 536 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 BANPQ8N9N5 519 aa15.3■□□□□ 0.04
BRAT1-201ENST00000340611 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.3■□□□□ 0.04
BRAT1-201ENST00000340611 FUBP3Q96I24 572 aaKnown RBP eCLIP15.3■□□□□ 0.04
BRAT1-201ENST00000340611 RNF157Q96PX1 679 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms