RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 NAB1Q13506 487 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 FSCBQ5H9T9 825 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 PPM1JQ5JR12 505 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 C6orf89Q6UWU4 347 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 TMC8Q8IU68 726 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 RNF135Q8IUD6 432 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 GPR65Q8IYL9 337 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 EXOC2Q96KP1 924 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 CORO1BQ9BR76 489 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 POLR1EQ9GZS1 481 aaKnown RBP22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 TCAF1Q9Y4C2 921 aa22.72■■□□□ 1.23
PDLIM2-203ENST00000339162 MYLKQ15746 1914 aa22.71■■□□□ 1.23
PDLIM2-203ENST00000339162 GREM1O60565 184 aa22.71■■□□□ 1.23
PDLIM2-203ENST00000339162 OXCT1P55809 520 aa22.71■■□□□ 1.23
PDLIM2-203ENST00000339162 CNGA3Q16281 694 aa22.71■■□□□ 1.23
PDLIM2-203ENST00000339162 RNF219Q5W0B1 726 aaPredicted RBP22.71■■□□□ 1.23
PDLIM2-203ENST00000339162 CARNMT1Q8N4J0 409 aa22.71■■□□□ 1.23
PDLIM2-203ENST00000339162 ARMC2Q8NEN0 867 aa22.71■■□□□ 1.23
PDLIM2-203ENST00000339162 LRRC3Q9BY71 257 aa22.71■■□□□ 1.23
PDLIM2-203ENST00000339162 MUC3BQ9H195 1237 aa22.71■■□□□ 1.23
PDLIM2-203ENST00000339162 MAFFQ9ULX9 164 aa22.71■■□□□ 1.23
PDLIM2-203ENST00000339162 PLLPQ9Y342 182 aa22.71■■□□□ 1.23
PDLIM2-203ENST00000339162 TBL1XO60907 577 aa22.7■■□□□ 1.23
PDLIM2-203ENST00000339162 DHRS4L1P0CG22 281 aa22.7■■□□□ 1.23
PDLIM2-203ENST00000339162 MYL4P12829 197 aa22.7■■□□□ 1.23
PDLIM2-203ENST00000339162 GRTP1Q5TC63 336 aa22.7■■□□□ 1.23
PDLIM2-203ENST00000339162 CXorf57Q6NSI4 855 aaKnown RBP22.7■■□□□ 1.23
PDLIM2-203ENST00000339162 POTEHQ6S545 545 aa22.7■■□□□ 1.23
PDLIM2-203ENST00000339162 TIFABQ6ZNK6 161 aa22.7■■□□□ 1.23
PDLIM2-203ENST00000339162 CMC1Q7Z7K0 106 aa22.7■■□□□ 1.23
PDLIM2-203ENST00000339162 MRPS31Q92665 395 aaKnown RBP22.7■■□□□ 1.23
PDLIM2-203ENST00000339162 RBBP8Q99708 897 aa22.7■■□□□ 1.23
PDLIM2-203ENST00000339162 C17orf80Q9BSJ5 609 aa22.7■■□□□ 1.23
PDLIM2-203ENST00000339162 MECRQ9BV79 373 aa22.7■■□□□ 1.23
PDLIM2-203ENST00000339162 SMG9Q9H0W8 520 aaKnown RBP22.7■■□□□ 1.23
PDLIM2-203ENST00000339162 VPS45Q9NRW7 570 aa22.7■■□□□ 1.23
PDLIM2-203ENST00000339162 HCFC1R1Q9NWW0 138 aa22.7■■□□□ 1.23
PDLIM2-203ENST00000339162 PHTF1Q9UMS5 762 aa22.7■■□□□ 1.23
PDLIM2-203ENST00000339162 ALPK3Q96L96 1907 aa22.7■■□□□ 1.22
PDLIM2-203ENST00000339162 OLFM2O95897 454 aa22.7■■□□□ 1.22
PDLIM2-203ENST00000339162 C1RP00736 705 aa22.7■■□□□ 1.22
PDLIM2-203ENST00000339162 BMPR1AP36894 532 aa22.7■■□□□ 1.22
PDLIM2-203ENST00000339162 IRX4P78413 519 aa22.7■■□□□ 1.22
PDLIM2-203ENST00000339162 PDE1CQ14123 709 aaPredicted RBP22.7■■□□□ 1.22
PDLIM2-203ENST00000339162 RNF187Q5TA31 235 aaPredicted RBP22.7■■□□□ 1.22
PDLIM2-203ENST00000339162 FSTL4Q6MZW2 842 aa22.7■■□□□ 1.22
PDLIM2-203ENST00000339162 DCLK2Q8N568 766 aa22.7■■□□□ 1.22
PDLIM2-203ENST00000339162 ACVR1CQ8NER5 493 aa22.7■■□□□ 1.22
PDLIM2-203ENST00000339162 POF1BQ8WVV4 589 aa22.7■■□□□ 1.22
PDLIM2-203ENST00000339162 MCOLN1Q9GZU1 580 aa22.7■■□□□ 1.22
PDLIM2-203ENST00000339162 CAB39LQ9H9S4 337 aa22.7■■□□□ 1.22
PDLIM2-203ENST00000339162 MTO1Q9Y2Z2 717 aaKnown RBP22.7■■□□□ 1.22
PDLIM2-203ENST00000339162 RRP15Q9Y3B9 282 aaKnown RBP22.7■■□□□ 1.22
PDLIM2-203ENST00000339162 ASB3Q9Y575 518 aa22.7■■□□□ 1.22
PDLIM2-203ENST00000339162 DOCK6Q96HP0 2047 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 MYOGP15173 224 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 ARNTP27540 789 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 RGRP47804 291 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 TNK2Q07912 1038 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 FRG1Q14331 258 aaKnown RBP22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 SIRPB2Q5JXA9 342 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 ZNF449Q6P9G9 518 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 PSRC1Q6PGN9 363 aaPredicted RBP22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 LINGO4Q6UY18 593 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 MICAL1Q8TDZ2 1067 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 VPS11Q9H270 941 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 UBA2Q9UBT2 640 aaPredicted RBP22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 STK39Q9UEW8 545 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 GGT7Q9UJ14 662 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 TBC1D30Q9Y2I9 924 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 ILVBLA1L0T0 632 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 C2orf71A6NGG8 1288 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 H0Y626 953 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 KDELR3O43731 214 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 RFPL2O75678 378 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 GLUD1P00367 558 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 ALADP13716 330 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 SERPINB4P48594 390 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 SERPINH1P50454 418 aaKnown RBP22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 PDPK2PQ6A1A2 396 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 C16orf46Q6P387 395 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 CCDC149Q6ZUS6 474 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 CHST9Q7L1S5 443 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 SPATA21Q7Z572 469 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 DENND6AQ8IWF6 608 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 MANSC1Q9H8J5 431 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 CHD9Q3L8U1 2897 aa22.69■■□□□ 1.22
PDLIM2-203ENST00000339162 SNAP91O60641 907 aa22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 ARHGEF15O94989 841 aa22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 PRKCGP05129 697 aa22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 NEFHP12036 1026 aa22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 BGNP21810 368 aa22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 MZF1P28698 734 aaPredicted RBP22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 TYK2P29597 1187 aa22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 CRHR1P34998 444 aa22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 PGGT1BP53609 377 aa22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 CTBP1Q13363 440 aa22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 RGS9BPQ6ZS82 235 aa22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 SRLQ86TD4 932 aa22.68■■□□□ 1.22
PDLIM2-203ENST00000339162 SETD3Q86TU7 594 aaPredicted RBP22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms