RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 FAM26DQ5JW98 314 aa19.04■□□□□ 0.64
PSPC1-201ENST00000338910 AMIGO2Q86SJ2 522 aa19.04■□□□□ 0.64
PSPC1-201ENST00000338910 FNDC8Q8TC99 324 aa19.04■□□□□ 0.64
PSPC1-201ENST00000338910 EDEM1Q92611 657 aa19.04■□□□□ 0.64
PSPC1-201ENST00000338910 SERPINI1Q99574 410 aa19.04■□□□□ 0.64
PSPC1-201ENST00000338910 MAN1C1Q9NR34 630 aa19.04■□□□□ 0.64
PSPC1-201ENST00000338910 SLC17A6Q9P2U8 582 aa19.04■□□□□ 0.64
PSPC1-201ENST00000338910 MOXD2PA6NHM9 499 aa19.04■□□□□ 0.64
PSPC1-201ENST00000338910 XRCC1P18887 633 aaPredicted RBP19.04■□□□□ 0.64
PSPC1-201ENST00000338910 PCSK1P29120 753 aa19.04■□□□□ 0.64
PSPC1-201ENST00000338910 BNIPLQ7Z465 357 aa19.04■□□□□ 0.64
PSPC1-201ENST00000338910 ERI1Q8IV48 349 aaKnown RBP19.04■□□□□ 0.64
PSPC1-201ENST00000338910 QKIQ96PU8 341 aaKnown RBP eCLIP19.04■□□□□ 0.648e-13■■■■□ 24.5
PSPC1-201ENST00000338910 PHF12Q96QT6 1004 aa19.04■□□□□ 0.64
PSPC1-201ENST00000338910 F8W810 466 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 FAM72CH0Y354 149 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 MFSD11O43934 449 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 ALDH1A2O94788 518 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 CPA3P15088 417 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 BDNFP23560 247 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 NUDT2P50583 147 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 APLP1P51693 650 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 COG7P83436 770 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 NIPAL4Q0D2K0 466 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 ZNF423Q2M1K9 1284 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 SLC9B1Q4ZJI4 515 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 PIGGQ5H8A4 983 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 FAM72AQ5TYM5 149 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 METTL21CQ5VZV1 264 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 FAM72DQ6L9T8 149 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 PACS1Q6VY07 963 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 TRIM67Q6ZTA4 783 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 FAM72BQ86X60 149 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 HTR3CQ8WXA8 447 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 MYLPFQ96A32 169 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 ANLNQ9NQW6 1124 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 CNGB3Q9NQW8 809 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 RSL24D1Q9UHA3 163 aaKnown RBP19.03■□□□□ 0.64
PSPC1-201ENST00000338910 VPS28Q9UK41 221 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 A0A1B0GTW7 788 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 PRSS51A0A1B0GVH4 220 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 A0A1W2PQ45 241 aaPredicted RBP19.03■□□□□ 0.64
PSPC1-201ENST00000338910 A0A1W2PQY0 241 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 AIM2O14862 343 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 DGKIO75912 1065 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 AMHP03971 560 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 ITGB1P05556 798 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 ODC1P11926 461 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 TPSB2P20231 275 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 GRIA1P42261 906 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 VEGFBP49765 207 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 HTRA3P83110 453 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 MBTPS1Q14703 1052 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 TPSAB1Q15661 275 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 STEAP4Q687X5 459 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 PSTKQ8IV42 348 aaKnown RBP19.03■□□□□ 0.64
PSPC1-201ENST00000338910 SNRNP27Q8WVK2 155 aaKnown RBP19.03■□□□□ 0.64
PSPC1-201ENST00000338910 HSPBAP1Q96EW2 488 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 SMARCD1Q96GM5 515 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 PKP2Q99959 881 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 CEP41Q9BYV8 373 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 HMX1Q9NP08 348 aaPredicted RBP19.03■□□□□ 0.64
PSPC1-201ENST00000338910 TMEM216Q9P0N5 145 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 PCDHB12Q9Y5F1 795 aa19.03■□□□□ 0.64
PSPC1-201ENST00000338910 HHLA1C9JL84 531 aa19.02■□□□□ 0.64
PSPC1-201ENST00000338910 GLDCP23378 1020 aa19.02■□□□□ 0.64
PSPC1-201ENST00000338910 ADRA1BP35368 520 aa19.02■□□□□ 0.64
PSPC1-201ENST00000338910 INSCQ1MX18 579 aa19.02■□□□□ 0.64
PSPC1-201ENST00000338910 RAB41Q5JT25 222 aa19.02■□□□□ 0.64
PSPC1-201ENST00000338910 C16orf89Q6UX73 402 aa19.02■□□□□ 0.64
PSPC1-201ENST00000338910 CD300LGQ6UXG3 332 aa19.02■□□□□ 0.64
PSPC1-201ENST00000338910 METTL23Q86XA0 190 aa19.02■□□□□ 0.64
PSPC1-201ENST00000338910 TP53INP2Q8IXH6 220 aa19.02■□□□□ 0.64
PSPC1-201ENST00000338910 CCNYQ8ND76 341 aa19.02■□□□□ 0.64
PSPC1-201ENST00000338910 MAPK15Q8TD08 544 aa19.02■□□□□ 0.64
PSPC1-201ENST00000338910 PGBD4Q96DM1 585 aa19.02■□□□□ 0.64
PSPC1-201ENST00000338910 TMEM209Q96SK2 561 aa19.02■□□□□ 0.64
PSPC1-201ENST00000338910 OXCT2Q9BYC2 517 aaPredicted RBP19.02■□□□□ 0.64
PSPC1-201ENST00000338910 CDH19Q9H159 772 aa19.02■□□□□ 0.64
PSPC1-201ENST00000338910 STARD7Q9NQZ5 370 aa19.02■□□□□ 0.64
PSPC1-201ENST00000338910 TMLHEQ9NVH6 421 aa19.02■□□□□ 0.64
PSPC1-201ENST00000338910 RCOR3Q9P2K3 495 aaPredicted RBP19.02■□□□□ 0.64
PSPC1-201ENST00000338910 PTCH2Q9Y6C5 1203 aa19.02■□□□□ 0.64
PSPC1-201ENST00000338910 CDY1Q9Y6F8 540 aa19.02■□□□□ 0.64
PSPC1-201ENST00000338910 I6L893 689 aaPredicted RBP19.02■□□□□ 0.63
PSPC1-201ENST00000338910 EEF2KO00418 725 aaKnown RBP19.02■□□□□ 0.63
PSPC1-201ENST00000338910 CAPN15O75808 1086 aa19.02■□□□□ 0.63
PSPC1-201ENST00000338910 LTFP02788 710 aa19.02■□□□□ 0.63
PSPC1-201ENST00000338910 ZNF23P17027 643 aa19.02■□□□□ 0.63
PSPC1-201ENST00000338910 RTN4RL1Q86UN2 441 aaPredicted RBP19.02■□□□□ 0.63
PSPC1-201ENST00000338910 DSELQ8IZU8 1212 aa19.02■□□□□ 0.63
PSPC1-201ENST00000338910 BBS5Q8N3I7 341 aa19.02■□□□□ 0.63
PSPC1-201ENST00000338910 GALNT4Q8N4A0 578 aa19.02■□□□□ 0.63
PSPC1-201ENST00000338910 ZNF781Q8N8C0 355 aa19.02■□□□□ 0.63
PSPC1-201ENST00000338910 KYQ8NBH2 561 aa19.02■□□□□ 0.63
PSPC1-201ENST00000338910 CDRT15Q96T59 188 aa19.02■□□□□ 0.63
PSPC1-201ENST00000338910 DDIT4Q9NX09 232 aa19.02■□□□□ 0.63
PSPC1-201ENST00000338910 THRAP10827 490 aa19.01■□□□□ 0.63
PSPC1-201ENST00000338910 CDK9P50750 372 aaKnown RBP19.01■□□□□ 0.63
PSPC1-201ENST00000338910 MS4A2Q01362 244 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms