RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 DNAJC16Q9Y2G8 782 aa10.96□□□□□ -0.65
RTN3-201ENST00000338850 A0A088AWK7 358 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 GOLGA8QA0A0J9YX86 632 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 SMIM28A0A1B0GU29 152 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 GOLGA8OA6NCC3 632 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 C2orf71A6NGG8 1288 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 GOLGA8NF8WBI6 632 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 EEF2KO00418 725 aaKnown RBP10.95□□□□□ -0.66
RTN3-201ENST00000338850 HUS1O60921 280 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 SIN3BO75182 1162 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 SRGAP2BP0DMP2 458 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 RALBP11234 206 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 TFE3P19532 575 aaPredicted RBP10.95□□□□□ -0.66
RTN3-201ENST00000338850 SP100P23497 879 aaPredicted RBP10.95□□□□□ -0.66
RTN3-201ENST00000338850 MGAT1P26572 445 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 PSMB4P28070 264 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 ALDH7A1P49419 539 aaKnown RBP10.95□□□□□ -0.66
RTN3-201ENST00000338850 COG7P83436 770 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 DSG1Q02413 1049 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 ASPHQ12797 758 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 NOMO2Q5JPE7 1267 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 RAB41Q5JT25 222 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 OR52E8Q6IFG1 317 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 GLB1LQ6UWU2 654 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 ACAD11Q709F0 780 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 LINC00523Q86TU6 105 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 TMEM173Q86WV6 379 aaPredicted RBP10.95□□□□□ -0.66
RTN3-201ENST00000338850 CNTN4Q8IWV2 1026 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 MRPL43Q8N983 215 aaKnown RBP10.95□□□□□ -0.66
RTN3-201ENST00000338850 SLC2A14Q8TDB8 520 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 PDCD6IPQ8WUM4 868 aaKnown RBP10.95□□□□□ -0.66
RTN3-201ENST00000338850 EDAQ92838 391 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 TMEM169Q96HH4 297 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 BTBD9Q96Q07 612 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 RTKNQ9BST9 563 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 C20orf27Q9GZN8 174 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 DPEP3Q9H4B8 488 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 S100A14Q9HCY8 104 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 SNX15Q9NRS6 342 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 SLC38A7Q9NVC3 462 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 TBC1D13Q9NVG8 400 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 SYBUQ9NX95 663 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 FNIP2Q9P278 1114 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 ARMCX1Q9P291 453 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 BCAP29Q9UHQ4 241 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 INPP5FQ9Y2H2 1132 aa10.95□□□□□ -0.66
RTN3-201ENST00000338850 ZCWPW2A0A1B0GU75 182 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 BUD23O43709 281 aaKnown RBP10.94□□□□□ -0.66
RTN3-201ENST00000338850 B4GALT3O60512 393 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 CLASP2O75122 1294 aaKnown RBP10.94□□□□□ -0.66
RTN3-201ENST00000338850 GALTP07902 379 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 CPA3P15088 417 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 HOXB8P17481 243 aaPredicted RBP10.94□□□□□ -0.66
RTN3-201ENST00000338850 PAX7P23759 505 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 PTPN3P26045 913 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 ADORA2BP29275 332 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 TYK2P29597 1187 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 ADRA1BP35368 520 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 GRIA1P42261 906 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 LHX1P48742 406 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 PSEN1P49768 467 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 IDH3AP50213 366 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 DAOAP59103 153 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 RPL10AP62906 217 aaKnown RBP10.94□□□□□ -0.66
RTN3-201ENST00000338850 PDE1BQ01064 536 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 ADIGQ0VDE8 80 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 MTM1Q13496 603 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 RCN2Q14257 317 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 RFTN1Q14699 578 aaPredicted RBP10.94□□□□□ -0.66
RTN3-201ENST00000338850 UGP2Q16851 508 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 ARL13BQ3SXY8 428 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 UBXN11Q5T124 520 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 C1orf146Q5VVC0 180 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 PDPK2PQ6A1A2 396 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 NAPEPLDQ6IQ20 393 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 EPGNQ6UW88 154 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 AGMOQ6ZNB7 445 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 HFE2Q6ZVN8 426 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 MRPL10Q7Z7H8 261 aaKnown RBP10.94□□□□□ -0.66
RTN3-201ENST00000338850 DHDDSQ86SQ9 333 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 CPSF7Q8N684 471 aaKnown RBP10.94□□□□□ -0.66
RTN3-201ENST00000338850 CLEC4CQ8WTT0 213 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 BCL7CQ8WUZ0 217 aaPredicted RBP10.94□□□□□ -0.66
RTN3-201ENST00000338850 PGBD4Q96DM1 585 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 IGSF21Q96ID5 467 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 RILPQ96NA2 401 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 GPR22Q99680 433 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 ECSITQ9BQ95 431 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 APOL5Q9BWW9 433 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 EIF2AQ9BY44 585 aaKnown RBP10.94□□□□□ -0.66
RTN3-201ENST00000338850 CDH19Q9H159 772 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 ZBP1Q9H171 429 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 LRRC4Q9HBW1 653 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 WDR6Q9NNW5 1121 aaKnown RBP10.94□□□□□ -0.66
RTN3-201ENST00000338850 VTI1BQ9UEU0 232 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 VANGL2Q9ULK5 521 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 HCFC2Q9Y5Z7 792 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 RPS6KL1Q9Y6S9 549 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 C5orf42Q9H799 3197 aa10.94□□□□□ -0.66
RTN3-201ENST00000338850 TECTAO75443 2155 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms