RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 TUBB4AP04350 444 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 RBP3P10745 1247 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 TDGF1P13385 188 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 CNR2P34972 360 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 SCNN1BP51168 640 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 ETF1P62495 437 aaKnown RBP12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 IFI35P80217 286 aaPredicted RBP12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 KLF1Q13351 362 aaPredicted RBP12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 PRKD1Q15139 912 aaPredicted RBP12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 CST6Q15828 149 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 RALGPS1Q5JS13 557 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 ATXN7L2Q5T6C5 722 aaPredicted RBP12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 ADAT2Q7Z6V5 191 aaKnown RBP12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 CHST14Q8NCH0 376 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 MDGA1Q8NFP4 955 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 PIP4K2CQ8TBX8 421 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 LRRN4Q8WUT4 740 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 HTR3CQ8WXA8 447 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 PPP1R16AQ96I34 528 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 WDR24Q96S15 920 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 OSBPL9Q96SU4 736 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 VAT1Q99536 393 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 IL12RB2Q99665 862 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 OMDQ99983 421 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 OSBPL1AQ9BXW6 950 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 CPEB1Q9BZB8 566 aaKnown RBP12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 ZDHHC6Q9H6R6 413 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 NT5MQ9NPB1 228 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 SCUBE2Q9NQ36 999 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 EVLQ9UI08 416 aaPredicted RBP12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 SAR1BQ9Y6B6 198 aa12.08□□□□□ -0.48
SPTLC1-202ENST00000337841 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 TCRBV7S2A1N4TA0A589 114 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 BCLAF3A2AJT9 711 aaKnown RBP12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 KPNA3O00505 521 aaPredicted RBP12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 MAP3K13O43283 966 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 LEFTY1O75610 366 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 C7P10643 843 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 STIP1P31948 543 aaKnown RBP12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 PSMD8P48556 350 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 AP1S1P61966 158 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 BCL2L1Q07817 233 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 CCNG2Q16589 344 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 TEX44Q53QW1 395 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 PAPD7Q5XG87 772 aaKnown RBP12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 GDPD4Q6W3E5 623 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 USP30Q70CQ3 517 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 B4GALNT4Q76KP1 1039 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 PID1Q7Z2X4 250 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 KBTBD6Q86V97 674 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 C11orf74Q86VG3 221 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 RASGEF1CQ8N431 466 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 HDDC3Q8N4P3 179 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 PAF1Q8N7H5 531 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 HCAR2Q8TDS4 363 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 NELL1Q92832 810 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 EXOC2Q96KP1 924 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 SPACA7Q96KW9 195 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 ZNF641Q96N77 438 aaPredicted RBP12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 QKIQ96PU8 341 aaKnown RBP eCLIP12.07□□□□□ -0.481e-6■■□□□ 12.8
SPTLC1-202ENST00000337841 NUDCD1Q96RS6 583 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 TUBGCP5Q96RT8 1024 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 TPSD1Q9BZJ3 242 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 POLR1EQ9GZS1 481 aaKnown RBP12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 SLC6A17Q9H1V8 727 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 PABPC3Q9H361 631 aaKnown RBP12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 ATP13A3Q9H7F0 1226 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 FBXL12Q9NXK8 326 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 TRHDEQ9UKU6 1024 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 TTC7AQ9ULT0 858 aaPredicted RBP12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 PCDHGA2Q9Y5H1 932 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 WASF2Q9Y6W5 498 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 DOCK4Q8N1I0 1966 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 KIAA1549LQ6ZVL6 1849 aa12.07□□□□□ -0.48
SPTLC1-202ENST00000337841 CFAP69A5D8W1 941 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 H0Y858 1186 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 MID1O15344 667 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 INSIG1O15503 277 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 RNASEH2AO75792 299 aaKnown RBP12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 RBL1P28749 1068 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 SERPINA4P29622 427 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 TPMTP51580 245 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 PTPN5P54829 565 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 DMWDQ09019 674 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 ZNF805Q5CZA5 627 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 CFAP58Q5T655 872 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 NCEH1Q6PIU2 408 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 ZC3H14Q6PJT7 736 aaKnown RBP12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 SYT10Q6XYQ8 523 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 SLC36A4Q6YBV0 504 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 PGBD5Q8N414 524 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 OR6K2Q8NGY2 324 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 SLC35B2Q8TB61 432 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 GRIN3AQ8TCU5 1115 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 ACTRT1Q8TDG2 376 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 C1orf54Q8WWF1 131 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 TEKT5Q96M29 485 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 AGAP3Q96P47 875 aa12.06□□□□□ -0.48
SPTLC1-202ENST00000337841 SEMA3CQ99985 751 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms