RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 MRRFQ96E11 262 aaKnown RBP14.9□□□□□ -0.02
CBX3-201ENST00000337620 MGME1Q9BQP7 344 aa14.9□□□□□ -0.02
CBX3-201ENST00000337620 TMEM109Q9BVC6 243 aa14.9□□□□□ -0.02
CBX3-201ENST00000337620 RABGEF1Q9UJ41 708 aa14.9□□□□□ -0.02
CBX3-201ENST00000337620 CDH7Q9ULB5 785 aa14.9□□□□□ -0.02
CBX3-201ENST00000337620 MTCH2Q9Y6C9 303 aa14.9□□□□□ -0.02
CBX3-201ENST00000337620 AP3B1O00203 1094 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 POLR3GO15318 223 aaPredicted RBP14.89□□□□□ -0.03
CBX3-201ENST00000337620 TBX10O75333 385 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 SPAG6O75602 509 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 PIAS1O75925 651 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 IVLP07476 585 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 RGRP47804 291 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 NPY2RP49146 381 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 SKOR1P84550 965 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 DHCR24Q15392 516 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 INO80DQ53TQ3 878 aaPredicted RBP14.89□□□□□ -0.03
CBX3-201ENST00000337620 ASTLQ6HA08 431 aaPredicted RBP14.89□□□□□ -0.03
CBX3-201ENST00000337620 UNC5AQ6ZN44 842 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 CROCCP2Q86T23 111 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 SLC25A41Q8N5S1 370 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 ACDQ96AP0 544 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 ZFYVE19Q96K21 471 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 XPO6Q96QU8 1125 aaKnown RBP14.89□□□□□ -0.03
CBX3-201ENST00000337620 S1PR5Q9H228 398 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 INTS6Q9UL03 887 aaKnown RBP14.89□□□□□ -0.03
CBX3-201ENST00000337620 FCF1Q9Y324 198 aaKnown RBP14.89□□□□□ -0.03
CBX3-201ENST00000337620 TCRBV9S1A1TA0A576 114 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 RGS16O15492 202 aaPredicted RBP14.89□□□□□ -0.03
CBX3-201ENST00000337620 SERPINF2P08697 491 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 SLC12A1Q13621 1099 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 EML3Q32P44 896 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 PITRM1Q5JRX3 1037 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 TANGO2Q6ICL3 276 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 RANBP10Q6VN20 620 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 MICALL1Q8N3F8 863 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 ASIC4Q96FT7 647 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 LMLNQ96KR4 655 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 ATP6V1G3Q96LB4 118 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 NOD2Q9HC29 1040 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 SCUBE2Q9NQ36 999 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 GGA2Q9UJY4 613 aa14.89□□□□□ -0.03
CBX3-201ENST00000337620 K7ERQ8 282 aa14.88□□□□□ -0.03
CBX3-201ENST00000337620 CYP17A1P05093 508 aa14.88□□□□□ -0.03
CBX3-201ENST00000337620 PGAM1P18669 254 aa14.88□□□□□ -0.03
CBX3-201ENST00000337620 GBP2P32456 591 aaPredicted RBP14.88□□□□□ -0.03
CBX3-201ENST00000337620 CHRNA4P43681 627 aa14.88□□□□□ -0.03
CBX3-201ENST00000337620 PLK1P53350 603 aa14.88□□□□□ -0.03
CBX3-201ENST00000337620 RHOAP61586 193 aa14.88□□□□□ -0.03
CBX3-201ENST00000337620 ADGRE1Q14246 886 aa14.88□□□□□ -0.03
CBX3-201ENST00000337620 EFTUD2Q15029 972 aaKnown RBP eCLIP14.88□□□□□ -0.032e-11■■■■□ 23.8
CBX3-201ENST00000337620 DENND5AQ6IQ26 1287 aa14.88□□□□□ -0.03
CBX3-201ENST00000337620 CES3Q6UWW8 571 aa14.88□□□□□ -0.03
CBX3-201ENST00000337620 CCNJLQ8IV13 435 aa14.88□□□□□ -0.03
CBX3-201ENST00000337620 SH2D3CQ8N5H7 860 aa14.88□□□□□ -0.03
CBX3-201ENST00000337620 IFT43Q96FT9 208 aa14.88□□□□□ -0.03
CBX3-201ENST00000337620 RPL10LQ96L21 214 aaKnown RBP14.88□□□□□ -0.03
CBX3-201ENST00000337620 NAT9Q9BTE0 207 aa14.88□□□□□ -0.03
CBX3-201ENST00000337620 IL22Q9GZX6 179 aa14.88□□□□□ -0.03
CBX3-201ENST00000337620 EBF3Q9H4W6 596 aa14.88□□□□□ -0.03
CBX3-201ENST00000337620 ACSS3Q9H6R3 686 aa14.88□□□□□ -0.03
CBX3-201ENST00000337620 PLAC1Q9HBJ0 212 aa14.88□□□□□ -0.03
CBX3-201ENST00000337620 ZFP14Q9HCL3 533 aa14.88□□□□□ -0.03
CBX3-201ENST00000337620 MARK1Q9P0L2 795 aa14.88□□□□□ -0.03
CBX3-201ENST00000337620 VPS18Q9P253 973 aa14.88□□□□□ -0.03
CBX3-201ENST00000337620 TBK1Q9UHD2 729 aa14.88□□□□□ -0.03
CBX3-201ENST00000337620 COLQQ9Y215 455 aaPredicted RBP14.88□□□□□ -0.03
CBX3-201ENST00000337620 INSIG1O15503 277 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 TCEA3O75764 348 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 POLBP06746 335 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 ADH5P11766 374 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 ARSAP15289 507 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 STX2P32856 288 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 GEMIN4P57678 1058 aaKnown RBP14.87□□□□□ -0.03
CBX3-201ENST00000337620 POU6F1Q14863 301 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 CTC1Q2NKJ3 1217 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 FUT11Q495W5 492 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 ALG1LQ6GMV1 187 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 ZNF557Q8N988 423 aaPredicted RBP14.87□□□□□ -0.03
CBX3-201ENST00000337620 GSDMBQ8TAX9 411 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 TADA1Q96BN2 335 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 RIPOR3Q96MK2 946 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 FAM161BQ96MY7 647 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 MYADMQ96S97 322 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 CYTH2Q99418 400 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 TRPV4Q9HBA0 871 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 THG1LQ9NWX6 298 aaKnown RBP14.87□□□□□ -0.03
CBX3-201ENST00000337620 CTNNAL1Q9UBT7 734 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 NOVA2Q9UNW9 492 aaKnown RBP14.87□□□□□ -0.03
CBX3-201ENST00000337620 SPTBN5Q9NRC6 3674 aaKnown RBP14.87□□□□□ -0.03
CBX3-201ENST00000337620 TRIM24O15164 1050 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 SMAD6O43541 496 aaKnown RBP14.87□□□□□ -0.03
CBX3-201ENST00000337620 ADH1CP00326 375 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 GSTA2P09210 222 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 PABPC1P11940 636 aaKnown RBP14.87□□□□□ -0.03
CBX3-201ENST00000337620 FCARP24071 287 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 CTSOP43234 321 aaPredicted RBP14.87□□□□□ -0.03
CBX3-201ENST00000337620 SERPINH1P50454 418 aaKnown RBP14.87□□□□□ -0.03
CBX3-201ENST00000337620 KLHL38Q2WGJ6 581 aa14.87□□□□□ -0.03
CBX3-201ENST00000337620 KBTBD12Q3ZCT8 623 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms